AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: GCA 017502845 1
-
AAI clade 2
medoid: GCA 002434265 1
-
AAI clade 3
medoid: GCA 013002175 1
-
AAI clade 4
medoid: GCA 900110395 1
-
AAI clade 5
medoid: GCA 012798955 1
-
AAI clade 6
medoid: GCA 013415575 1
-
AAI clade 7
medoid: GCF 008638345 1
-
AAI clade 8
medoid: GCF 000807255 1
-
AAI clade 8-1
medoid: GCA 904418825 1
-
AAI clade 8-2
medoid: GCF 016316925 1
-
AAI clade 8-3
medoid: GCF 900113965 1
-
AAI clade 8-3-1
medoid: GCF 902983995 1
-
AAI clade 8-3-2
medoid: GCF 900111035 1
-
AAI clade 8-3-2-1
medoid: GCF 900111035 1
-
AAI clade 8-3-2-1-1
medoid: GCA 017940255 1
-
AAI clade 8-3-2-1-2
medoid: GCF 900111035 1
-
AAI clade 8-3-2-1-2-1
medoid: GCA 002395155 1
-
AAI clade 8-3-2-1-2-2
medoid: GCF 900111035 1
7 datasets: GCA 004554075 1 (AAI: 83.15%), GCA 016293915 1 (AAI: 82.12%), GCA 017962415 1 (AAI: 74.4%), GCA 902789325 1 (AAI: 80.24%), GCF 000421345 1 (AAI: 82.8%), GCF 900111035 1 (AAI: 100.0%), and GCF 900113965 1 (AAI: 89.86%)
-
AAI clade 8-3-2-1-2-3
medoid: GCF 014334335 1
-
AAI clade 8-3-2-1-2-1
medoid: GCA 002395155 1
-
AAI clade 8-3-2-1-3
medoid: GCA 016286365 1
-
AAI clade 8-3-2-1-4
medoid: GCA 016290335 1
-
AAI clade 8-3-2-1-1
medoid: GCA 017940255 1
-
AAI clade 8-3-2-2
medoid: GCA 002315375 1
-
AAI clade 8-3-2-1
medoid: GCF 900111035 1
-
AAI clade 8-3-3
medoid: GCA 018064525 1
-
AAI clade 8-3-4
medoid: GCA 002391235 1
-
AAI clade 8-3-5
medoid: GCA 017386165 1
-
AAI clade 8-3-6
medoid: GCA 002478955 1
-
AAI clade 8-3-7
medoid: GCA 900769325 1
-
AAI clade 8-3-8
medoid: GCA 017521105 1
-
AAI clade 8-3-9
medoid: GCF 017893945 1
-
AAI clade 8-3-10
medoid: GCF 000260795 1
-
AAI clade 8-3-11
medoid: GCA 017551545 1
-
AAI clade 8-3-1
medoid: GCF 902983995 1
-
AAI clade 8-4
medoid: GCA 900547475 1
-
AAI clade 8-5
medoid: GCA 012728125 1
-
AAI clade 8-6
medoid: GCA 001000865 1
-
AAI clade 8-7
medoid: GCA 002786595 1
-
AAI clade 8-8
medoid: GCF 000173795 1
-
AAI clade 8-9
medoid: GCF 000159695 1
-
AAI clade 8-10
medoid: GCF 017161305 1
-
AAI clade 8-11
medoid: GCA 009785215 1
-
AAI clade 8-12
medoid: GCF 018223745 1
-
AAI clade 8-13
medoid: GCF 000266865 1
-
AAI clade 8-14
medoid: GCA 016281495 1
-
AAI clade 8-15
medoid: GCF 018861905 1
-
AAI clade 8-16
medoid: GCA 015056885 1
-
AAI clade 8-17
medoid: GCA 017936375 1
-
AAI clade 8-18
medoid: GCF 001436755 1
-
AAI clade 8-19
medoid: GCF 018437235 1
-
AAI clade 8-1
medoid: GCA 904418825 1
-
AAI clade 9
medoid: GCF 001050135 1
-
AAI clade 10
medoid: GCA 002717245 1
-
AAI clade 11
medoid: GCA 017478625 1
-
AAI clade 12
medoid: GCA 009773355 1
-
AAI clade 13
medoid: GCA 905200435 1
-
AAI clade 14
medoid: GCA 017516885 1
-
AAI clade 15
medoid: GCA 004321885 1
-
AAI clade 16
medoid: GCA 905236305 1
-
AAI clade 17
medoid: GCA 017648525 1
-
AAI clade 18
medoid: GCA 019113065 1
-
AAI clade 19
medoid: GCA 016795075 1
-
AAI clade 20
medoid: GCF 001467025 1
-
AAI clade 21
medoid: GCA 017642855 1
-
AAI clade 22
medoid: GCA 017408305 1
-
AAI clade 23
medoid: GCA 002436405 1