AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
    • AAI clade 7-1 medoid: GCF 000735435 1
    • AAI clade 7-2 medoid: GCF 900476395 1
    • AAI clade 7-3 medoid: GCF 013416325 1
    • AAI clade 7-4 medoid: GCF 000302535 1
    • AAI clade 7-5 medoid: GCF 003987045 1
    • AAI clade 7-6 medoid: GCF 015163665 1
    • AAI clade 7-7 medoid: GCA 004354085 1
      • AAI clade 7-7-1 medoid: GCA 000511875 1
        • AAI clade 7-7-1-1 medoid: GCA 000511875 1
          6 datasets: GCA 000153445 1 (AAI: 83.78%), GCA 000511875 1 (AAI: 100.0%), GCA 017858135 1 (AAI: 72.94%), GCA 017858295 1 (AAI: 83.64%), GCA 905478725 1 (AAI: 84.11%), and GCA 905478975 1 (AAI: 81.23%)
        • AAI clade 7-7-1-2 medoid: GCA 002162755 1
        • AAI clade 7-7-1-3 medoid: GCA 002169625 2
        • AAI clade 7-7-1-4 medoid: GCA 002334915 1
        • AAI clade 7-7-1-5 medoid: GCA 002335945 1
        • AAI clade 7-7-1-6 medoid: GCA 014381985 1
        • AAI clade 7-7-1-7 medoid: GCA 002390285 1
        • AAI clade 7-7-1-8 medoid: GCA 002469845 1
        • AAI clade 7-7-1-9 medoid: GCA 002469975 1
        • AAI clade 7-7-1-10 medoid: GCA 002692165 1
        • AAI clade 7-7-1-11 medoid: GCA 902596775 1
        • AAI clade 7-7-1-12 medoid: GCA 003448675 1
        • AAI clade 7-7-1-13 medoid: GCA 003509025 1
        • AAI clade 7-7-1-14 medoid: GCA 004535795 1
        • AAI clade 7-7-1-15 medoid: GCA 019090225 1
        • AAI clade 7-7-1-16 medoid: GCA 902511425 1
        • AAI clade 7-7-1-17 medoid: GCA 902557735 1
        • AAI clade 7-7-1-18 medoid: GCA 902623535 1
      • AAI clade 7-7-2 medoid: GCA 004354085 1
    • AAI clade 7-8 medoid: GCA 015484945 1
    • AAI clade 7-9 medoid: GCF 000310185 1
    • AAI clade 7-10 medoid: GCA 000227525 2
    • AAI clade 7-11 medoid: GCF 001650915 1
    • AAI clade 7-12 medoid: GCA 900544345 1
    • AAI clade 7-13 medoid: GCA 008081045 1
    • AAI clade 7-14 medoid: GCF 002993325 1
    • AAI clade 7-15 medoid: GCF 900114355 1
    • AAI clade 7-16 medoid: GCF 016653465 1
    • AAI clade 7-17 medoid: GCF 001591365 1
    • AAI clade 7-18 medoid: GCF 900114735 1
    • AAI clade 7-19 medoid: GCA 007131235 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1