AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 7-1
medoid: GCF 000735435 1
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AAI clade 7-2
medoid: GCF 900476395 1
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AAI clade 7-3
medoid: GCF 013416325 1
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AAI clade 7-3-1
medoid: GCF 002374315 1
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AAI clade 7-3-2
medoid: GCF 014164585 1
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AAI clade 7-3-3
medoid: GCF 013416325 1
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AAI clade 7-3-3-1
medoid: GCF 013416325 1
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AAI clade 7-3-3-1-1
medoid: GCF 000336575 1
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AAI clade 7-3-3-1-1-1
medoid: GCA 001507855 1
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AAI clade 7-3-3-1-1-2
medoid: GCF 000336575 1
8 datasets: GCF 000236035 1 (AAI: 93.0%), GCF 000336575 1 (AAI: 100.0%), GCF 001651035 1 (AAI: 92.74%), GCF 001882345 1 (AAI: 93.42%), GCF 002211105 1 (AAI: 94.44%), GCF 002257525 1 (AAI: 93.13%), GCF 004364445 1 (AAI: 96.44%), and GCF 013416325 1 (AAI: 97.12%)
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AAI clade 7-3-3-1-1-1
medoid: GCA 001507855 1
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AAI clade 7-3-3-1-2
medoid: GCF 013371085 1
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AAI clade 7-3-3-1-3
medoid: GCA 004295565 1
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AAI clade 7-3-3-1-4
medoid: GCF 002332255 1
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AAI clade 7-3-3-1-5
medoid: GCF 007991175 1
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AAI clade 7-3-3-1-1
medoid: GCF 000336575 1
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AAI clade 7-3-3-2
medoid: GCA 007182875 1
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AAI clade 7-3-3-3
medoid: GCA 007692655 1
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AAI clade 7-3-3-1
medoid: GCF 013416325 1
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AAI clade 7-3-4
medoid: GCF 009902005 1
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AAI clade 7-3-5
medoid: GCF 000196875 2
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AAI clade 7-3-6
medoid: GCA 003553625 1
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AAI clade 7-3-7
medoid: GCF 900112235 1
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AAI clade 7-3-8
medoid: GCF 001545155 1
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AAI clade 7-3-9
medoid: GCF 015992245 1
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AAI clade 7-3-10
medoid: GCF 000422325 1
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AAI clade 7-3-11
medoid: GCF 000300075 1
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AAI clade 7-3-12
medoid: GCF 900111305 1
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AAI clade 7-3-13
medoid: GCF 012062845 1
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AAI clade 7-3-14
medoid: GCF 002157205 1
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AAI clade 7-3-15
medoid: GCF 003336665 1
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AAI clade 7-3-1
medoid: GCF 002374315 1
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AAI clade 7-4
medoid: GCF 000302535 1
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AAI clade 7-5
medoid: GCF 003987045 1
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AAI clade 7-6
medoid: GCF 015163665 1
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AAI clade 7-7
medoid: GCA 004354085 1
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AAI clade 7-8
medoid: GCA 015484945 1
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AAI clade 7-9
medoid: GCF 000310185 1
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AAI clade 7-10
medoid: GCA 000227525 2
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AAI clade 7-11
medoid: GCF 001650915 1
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AAI clade 7-12
medoid: GCA 900544345 1
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AAI clade 7-13
medoid: GCA 008081045 1
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AAI clade 7-14
medoid: GCF 002993325 1
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AAI clade 7-15
medoid: GCF 900114355 1
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AAI clade 7-16
medoid: GCF 016653465 1
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AAI clade 7-17
medoid: GCF 001591365 1
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AAI clade 7-18
medoid: GCF 900114735 1
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AAI clade 7-19
medoid: GCA 007131235 1
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AAI clade 7-1
medoid: GCF 000735435 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1