AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 7-1
medoid: GCF 000735435 1
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AAI clade 7-2
medoid: GCF 900476395 1
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AAI clade 7-3
medoid: GCF 013416325 1
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AAI clade 7-4
medoid: GCF 000302535 1
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AAI clade 7-5
medoid: GCF 003987045 1
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AAI clade 7-6
medoid: GCF 015163665 1
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AAI clade 7-7
medoid: GCA 004354085 1
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AAI clade 7-8
medoid: GCA 015484945 1
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AAI clade 7-9
medoid: GCF 000310185 1
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AAI clade 7-10
medoid: GCA 000227525 2
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AAI clade 7-11
medoid: GCF 001650915 1
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AAI clade 7-12
medoid: GCA 900544345 1
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AAI clade 7-13
medoid: GCA 008081045 1
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AAI clade 7-14
medoid: GCF 002993325 1
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AAI clade 7-15
medoid: GCF 900114355 1
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AAI clade 7-15-1
medoid: GCF 014764385 1
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AAI clade 7-15-2
medoid: GCA 013298265 1
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AAI clade 7-15-3
medoid: GCF 000768335 1
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AAI clade 7-15-4
medoid: GCF 014192745 1
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AAI clade 7-15-5
medoid: GCA 002344355 1
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AAI clade 7-15-6
medoid: GCF 900101825 1
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AAI clade 7-15-7
medoid: GCA 002839995 1
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AAI clade 7-15-8
medoid: GCF 003697345 1
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AAI clade 7-15-9
medoid: GCA 002995625 1
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AAI clade 7-15-10
medoid: GCA 003233305 1
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AAI clade 7-15-11
medoid: GCF 003367355 1
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AAI clade 7-15-12
medoid: GCA 016789405 1
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AAI clade 7-15-13
medoid: GCA 005772945 1
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AAI clade 7-15-14
medoid: GCA 009692505 1
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AAI clade 7-15-15
medoid: GCF 014836665 1
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AAI clade 7-15-16
medoid: GCF 001717465 1
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AAI clade 7-15-17
medoid: GCA 013141175 1
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AAI clade 7-15-18
medoid: GCF 900114355 1
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AAI clade 7-15-19
medoid: GCA 014879375 1
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AAI clade 7-15-20
medoid: GCA 016721845 1
4 datasets: GCA 016182785 1 (AAI: 72.56%), GCA 016703225 1 (AAI: 71.42%), GCA 016708465 1 (AAI: 75.75%), and GCA 016721845 1 (AAI: 100.0%)
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AAI clade 7-15-21
medoid: GCF 004346265 1
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AAI clade 7-15-22
medoid: GCA 017997455 1
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AAI clade 7-15-23
medoid: GCA 018241365 1
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AAI clade 7-15-24
medoid: GCA 018242425 1
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AAI clade 7-15-25
medoid: GCA 018242485 1
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AAI clade 7-15-26
medoid: GCF 015453285 1
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AAI clade 7-15-27
medoid: GCA 903831745 1
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AAI clade 7-15-28
medoid: GCF 001442515 1
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AAI clade 7-15-29
medoid: GCF 000472505 1
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AAI clade 7-15-30
medoid: GCF 004118975 1
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AAI clade 7-15-31
medoid: GCF 014779555 1
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AAI clade 7-15-32
medoid: GCF 015209765 1
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AAI clade 7-15-33
medoid: GCF 000953855 2
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AAI clade 7-15-34
medoid: GCF 004168365 1
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AAI clade 7-15-35
medoid: GCF 014145325 1
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AAI clade 7-15-36
medoid: GCF 014202935 1
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AAI clade 7-15-37
medoid: GCF 008312895 1
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AAI clade 7-15-1
medoid: GCF 014764385 1
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AAI clade 7-16
medoid: GCF 016653465 1
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AAI clade 7-17
medoid: GCF 001591365 1
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AAI clade 7-18
medoid: GCF 900114735 1
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AAI clade 7-19
medoid: GCA 007131235 1
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AAI clade 7-1
medoid: GCF 000735435 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1