AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: GCA 017502845 1
-
AAI clade 2
medoid: GCA 002434265 1
-
AAI clade 3
medoid: GCA 013002175 1
-
AAI clade 4
medoid: GCA 900110395 1
-
AAI clade 5
medoid: GCA 012798955 1
-
AAI clade 6
medoid: GCA 013415575 1
-
AAI clade 7
medoid: GCF 008638345 1
-
AAI clade 7-1
medoid: GCF 000735435 1
-
AAI clade 7-2
medoid: GCF 900476395 1
-
AAI clade 7-3
medoid: GCF 013416325 1
-
AAI clade 7-4
medoid: GCF 000302535 1
-
AAI clade 7-5
medoid: GCF 003987045 1
-
AAI clade 7-6
medoid: GCF 015163665 1
-
AAI clade 7-7
medoid: GCA 004354085 1
-
AAI clade 7-8
medoid: GCA 015484945 1
-
AAI clade 7-9
medoid: GCF 000310185 1
-
AAI clade 7-10
medoid: GCA 000227525 2
-
AAI clade 7-11
medoid: GCF 001650915 1
-
AAI clade 7-12
medoid: GCA 900544345 1
-
AAI clade 7-13
medoid: GCA 008081045 1
-
AAI clade 7-13-1
medoid: GCA 017853205 1
-
AAI clade 7-13-2
medoid: GCA 902591495 1
-
AAI clade 7-13-3
medoid: GCA 002706685 1
5 datasets: GCA 002354805 1 (AAI: 96.72%), GCA 002706685 1 (AAI: 100.0%), GCA 004535785 1 (AAI: 64.09%), GCF 001444425 1 (AAI: 69.55%), and GCF 001642735 1 (AAI: 62.97%)
-
AAI clade 7-13-4
medoid: GCA 002730035 1
-
AAI clade 7-13-5
medoid: GCA 016762995 1
-
AAI clade 7-13-6
medoid: GCA 002414385 1
-
AAI clade 7-13-7
medoid: GCA 008081045 1
-
AAI clade 7-13-8
medoid: GCA 002711845 1
-
AAI clade 7-13-9
medoid: GCA 009922595 1
-
AAI clade 7-13-10
medoid: GCA 902609415 1
-
AAI clade 7-13-11
medoid: GCA 903837345 1
-
AAI clade 7-13-1
medoid: GCA 017853205 1
-
AAI clade 7-14
medoid: GCF 002993325 1
-
AAI clade 7-15
medoid: GCF 900114355 1
-
AAI clade 7-16
medoid: GCF 016653465 1
-
AAI clade 7-17
medoid: GCF 001591365 1
-
AAI clade 7-18
medoid: GCF 900114735 1
-
AAI clade 7-19
medoid: GCA 007131235 1
-
AAI clade 7-1
medoid: GCF 000735435 1
-
AAI clade 8
medoid: GCF 000807255 1
-
AAI clade 9
medoid: GCF 001050135 1
-
AAI clade 10
medoid: GCA 002717245 1
-
AAI clade 11
medoid: GCA 017478625 1
-
AAI clade 12
medoid: GCA 009773355 1
-
AAI clade 13
medoid: GCA 905200435 1
-
AAI clade 14
medoid: GCA 017516885 1
-
AAI clade 15
medoid: GCA 004321885 1
-
AAI clade 16
medoid: GCA 905236305 1
-
AAI clade 17
medoid: GCA 017648525 1
-
AAI clade 18
medoid: GCA 019113065 1
-
AAI clade 19
medoid: GCA 016795075 1
-
AAI clade 20
medoid: GCF 001467025 1
-
AAI clade 21
medoid: GCA 017642855 1
-
AAI clade 22
medoid: GCA 017408305 1
-
AAI clade 23
medoid: GCA 002436405 1