AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
    • AAI clade 7-1 medoid: GCF 000735435 1
    • AAI clade 7-2 medoid: GCF 900476395 1
    • AAI clade 7-3 medoid: GCF 013416325 1
    • AAI clade 7-4 medoid: GCF 000302535 1
    • AAI clade 7-5 medoid: GCF 003987045 1
    • AAI clade 7-6 medoid: GCF 015163665 1
    • AAI clade 7-7 medoid: GCA 004354085 1
    • AAI clade 7-8 medoid: GCA 015484945 1
    • AAI clade 7-9 medoid: GCF 000310185 1
    • AAI clade 7-10 medoid: GCA 000227525 2
    • AAI clade 7-11 medoid: GCF 001650915 1
      • AAI clade 7-11-1 medoid: GCA 013215505 1
      • AAI clade 7-11-2 medoid: GCF 001650915 1
        • AAI clade 7-11-2-1 medoid: GCF 001650915 1
          • AAI clade 7-11-2-1-1 medoid: GCF 005871205 1
          • AAI clade 7-11-2-1-2 medoid: GCA 002707215 1
          • AAI clade 7-11-2-1-3 medoid: GCA 002717955 1
          • AAI clade 7-11-2-1-4 medoid: GCA 002747055 1
          • AAI clade 7-11-2-1-5 medoid: GCF 001650915 1
            • AAI clade 7-11-2-1-5-1 medoid: GCA 003030785 1
            • AAI clade 7-11-2-1-5-2 medoid: GCF 001045555 1
            • AAI clade 7-11-2-1-5-3 medoid: GCF 002933275 1
            • AAI clade 7-11-2-1-5-4 medoid: GCF 002744715 1
            • AAI clade 7-11-2-1-5-5 medoid: GCF 002744735 1
            • AAI clade 7-11-2-1-5-6 medoid: GCF 003441595 1
              1 dataset: GCF 003441595 1 (AAI: 100.0%)
            • AAI clade 7-11-2-1-5-7 medoid: GCF 008107725 1
            • AAI clade 7-11-2-1-5-8 medoid: GCF 009617755 1
            • AAI clade 7-11-2-1-5-9 medoid: GCF 018860425 1
            • AAI clade 7-11-2-1-5-10 medoid: GCF 900115175 1
            • AAI clade 7-11-2-1-5-11 medoid: GCF 900188435 1
          • AAI clade 7-11-2-1-6 medoid: GCA 006212045 1
          • AAI clade 7-11-2-1-7 medoid: GCA 007692645 1
          • AAI clade 7-11-2-1-8 medoid: GCF 900114155 1
          • AAI clade 7-11-2-1-9 medoid: GCA 014359475 1
          • AAI clade 7-11-2-1-10 medoid: GCA 014859525 1
          • AAI clade 7-11-2-1-11 medoid: GCA 015488775 1
          • AAI clade 7-11-2-1-12 medoid: GCF 002407605 1
          • AAI clade 7-11-2-1-13 medoid: GCA 018334495 1
          • AAI clade 7-11-2-1-14 medoid: GCF 003315345 1
          • AAI clade 7-11-2-1-15 medoid: GCF 003007715 1
          • AAI clade 7-11-2-1-16 medoid: GCF 004327985 1
          • AAI clade 7-11-2-1-17 medoid: GCF 000397065 2
          • AAI clade 7-11-2-1-18 medoid: GCF 004000275 1
          • AAI clade 7-11-2-1-19 medoid: GCF 001752365 1
          • AAI clade 7-11-2-1-20 medoid: GCF 002514725 1
          • AAI clade 7-11-2-1-21 medoid: GCF 002563885 1
          • AAI clade 7-11-2-1-22 medoid: GCF 016597725 1
          • AAI clade 7-11-2-1-23 medoid: GCF 003096655 1
          • AAI clade 7-11-2-1-24 medoid: GCF 003336705 1
          • AAI clade 7-11-2-1-25 medoid: GCF 005298175 1
          • AAI clade 7-11-2-1-26 medoid: GCF 004851605 1
          • AAI clade 7-11-2-1-27 medoid: GCF 009193265 1
          • AAI clade 7-11-2-1-28 medoid: GCF 011074795 1
          • AAI clade 7-11-2-1-29 medoid: GCF 900111555 1
          • AAI clade 7-11-2-1-30 medoid: GCF 900106945 1
          • AAI clade 7-11-2-1-31 medoid: GCF 900156675 1
        • AAI clade 7-11-2-2 medoid: GCA 002708905 1
      • AAI clade 7-11-3 medoid: GCF 002286965 1
    • AAI clade 7-12 medoid: GCA 900544345 1
    • AAI clade 7-13 medoid: GCA 008081045 1
    • AAI clade 7-14 medoid: GCF 002993325 1
    • AAI clade 7-15 medoid: GCF 900114355 1
    • AAI clade 7-16 medoid: GCF 016653465 1
    • AAI clade 7-17 medoid: GCF 001591365 1
    • AAI clade 7-18 medoid: GCF 900114735 1
    • AAI clade 7-19 medoid: GCA 007131235 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1