AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 6-1
medoid: GCF 000336775 1
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AAI clade 6-2
medoid: GCA 013153105 1
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AAI clade 6-3
medoid: GCF 000223905 1
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AAI clade 6-4
medoid: GCA 012798025 1
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AAI clade 6-5
medoid: GCF 006740685 1
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AAI clade 6-6
medoid: GCA 017935945 1
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AAI clade 6-7
medoid: GCA 000690595 2
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AAI clade 6-8
medoid: GCF 018228765 1
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AAI clade 6-9
medoid: GCA 015521605 1
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AAI clade 6-9-1
medoid: GCF 001577775 1
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AAI clade 6-9-2
medoid: GCA 018920185 1
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AAI clade 6-9-3
medoid: GCA 018304605 1
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AAI clade 6-9-4
medoid: GCA 004375695 1
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AAI clade 6-9-5
medoid: GCF 012027325 1
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AAI clade 6-9-6
medoid: GCA 001587575 1
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AAI clade 6-9-7
medoid: GCA 013425325 1
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AAI clade 6-9-8
medoid: GCA 013425405 1
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AAI clade 6-9-9
medoid: GCF 000585495 1
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AAI clade 6-9-10
medoid: GCA 004212155 1
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AAI clade 6-9-11
medoid: GCF 001317345 1
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AAI clade 6-9-12
medoid: GCA 018304445 1
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AAI clade 6-9-13
medoid: GCF 012027645 1
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AAI clade 6-9-13-1
medoid: GCF 012027645 1
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AAI clade 6-9-13-2
medoid: GCA 015520705 1
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AAI clade 6-9-13-3
medoid: GCF 002214565 1
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AAI clade 6-9-13-4
medoid: GCA 018304505 1
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AAI clade 6-9-13-5
medoid: GCA 018609855 1
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AAI clade 6-9-13-6
medoid: GCF 012027555 1
4 datasets: GCF 000018365 1 (AAI: 79.33%), GCF 001647085 1 (AAI: 93.16%), GCF 012027395 1 (AAI: 80.25%), and GCF 012027555 1 (AAI: 100.0%)
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AAI clade 6-9-13-7
medoid: GCF 000966265 1
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AAI clade 6-9-13-8
medoid: GCF 002214585 1
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AAI clade 6-9-13-1
medoid: GCF 012027645 1
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AAI clade 6-9-14
medoid: GCA 015520865 1
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AAI clade 6-9-1
medoid: GCF 001577775 1
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AAI clade 6-10
medoid: GCA 002506275 1
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AAI clade 6-11
medoid: GCA 018396875 1
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AAI clade 6-12
medoid: GCF 000969905 1
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AAI clade 6-13
medoid: GCA 002067325 1
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AAI clade 6-14
medoid: GCA 002762865 1
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AAI clade 6-15
medoid: GCF 000025525 1
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AAI clade 6-16
medoid: GCF 000025505 1
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AAI clade 6-17
medoid: GCA 017608985 1
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AAI clade 6-18
medoid: GCA 005878985 1
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AAI clade 6-19
medoid: GCF 001017125 1
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AAI clade 6-20
medoid: GCA 016840855 1
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AAI clade 6-21
medoid: GCA 902560445 1
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AAI clade 6-22
medoid: GCA 005881695 1
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AAI clade 6-23
medoid: GCA 005222975 1
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AAI clade 6-24
medoid: GCF 007826885 1
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AAI clade 6-25
medoid: GCA 902784195 1
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AAI clade 6-26
medoid: GCA 015062915 1
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AAI clade 6-1
medoid: GCF 000336775 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1