AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 6-1
medoid: GCF 000336775 1
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AAI clade 6-2
medoid: GCA 013153105 1
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AAI clade 6-3
medoid: GCF 000223905 1
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AAI clade 6-4
medoid: GCA 012798025 1
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AAI clade 6-5
medoid: GCF 006740685 1
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AAI clade 6-6
medoid: GCA 017935945 1
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AAI clade 6-7
medoid: GCA 000690595 2
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AAI clade 6-7-1
medoid: GCA 000690595 2
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AAI clade 6-7-1-1
medoid: GCF 013342135 1
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AAI clade 6-7-1-1-1
medoid: GCF 003610195 1
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AAI clade 6-7-1-1-2
medoid: GCF 000337535 1
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AAI clade 6-7-1-1-3
medoid: GCF 003430825 1
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AAI clade 6-7-1-1-4
medoid: GCA 003552325 1
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AAI clade 6-7-1-1-5
medoid: GCA 003552885 1
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AAI clade 6-7-1-1-6
medoid: GCF 000337675 1
5 datasets: GCA 003559215 1 (AAI: 83.54%), GCF 000328685 1 (AAI: 77.7%), GCF 000337675 1 (AAI: 100.0%), GCF 000337695 1 (AAI: 75.98%), and GCF 008122205 1 (AAI: 70.14%)
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AAI clade 6-7-1-1-7
medoid: GCF 900100335 1
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AAI clade 6-7-1-1-8
medoid: GCA 007119345 1
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AAI clade 6-7-1-1-9
medoid: GCA 007128515 1
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AAI clade 6-7-1-1-10
medoid: GCA 017094485 1
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AAI clade 6-7-1-1-11
medoid: GCF 013342135 1
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AAI clade 6-7-1-1-12
medoid: GCF 001861355 1
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AAI clade 6-7-1-1-13
medoid: GCF 000328525 1
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AAI clade 6-7-1-1-14
medoid: GCF 000337735 1
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AAI clade 6-7-1-1-15
medoid: GCF 001971705 1
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AAI clade 6-7-1-1-16
medoid: GCF 011043775 1
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AAI clade 6-7-1-1-17
medoid: GCF 003344565 1
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AAI clade 6-7-1-1-18
medoid: GCF 003697815 1
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AAI clade 6-7-1-1-19
medoid: GCF 003841505 1
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AAI clade 6-7-1-1-20
medoid: GCF 011440375 1
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AAI clade 6-7-1-1-21
medoid: GCF 900103505 1
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AAI clade 6-7-1-1-1
medoid: GCF 003610195 1
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AAI clade 6-7-1-2
medoid: GCF 000731985 1
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AAI clade 6-7-1-3
medoid: GCA 014297435 1
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AAI clade 6-7-1-1
medoid: GCF 013342135 1
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AAI clade 6-7-2
medoid: GCA 005239435 1
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AAI clade 6-7-1
medoid: GCA 000690595 2
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AAI clade 6-8
medoid: GCF 018228765 1
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AAI clade 6-9
medoid: GCA 015521605 1
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AAI clade 6-10
medoid: GCA 002506275 1
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AAI clade 6-11
medoid: GCA 018396875 1
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AAI clade 6-12
medoid: GCF 000969905 1
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AAI clade 6-13
medoid: GCA 002067325 1
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AAI clade 6-14
medoid: GCA 002762865 1
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AAI clade 6-15
medoid: GCF 000025525 1
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AAI clade 6-16
medoid: GCF 000025505 1
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AAI clade 6-17
medoid: GCA 017608985 1
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AAI clade 6-18
medoid: GCA 005878985 1
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AAI clade 6-19
medoid: GCF 001017125 1
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AAI clade 6-20
medoid: GCA 016840855 1
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AAI clade 6-21
medoid: GCA 902560445 1
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AAI clade 6-22
medoid: GCA 005881695 1
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AAI clade 6-23
medoid: GCA 005222975 1
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AAI clade 6-24
medoid: GCF 007826885 1
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AAI clade 6-25
medoid: GCA 902784195 1
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AAI clade 6-26
medoid: GCA 015062915 1
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AAI clade 6-1
medoid: GCF 000336775 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1