AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: GCA 017502845 1
-
AAI clade 2
medoid: GCA 002434265 1
-
AAI clade 3
medoid: GCA 013002175 1
-
AAI clade 4
medoid: GCA 900110395 1
-
AAI clade 5
medoid: GCA 012798955 1
-
AAI clade 6
medoid: GCA 013415575 1
-
AAI clade 6-1
medoid: GCF 000336775 1
-
AAI clade 6-2
medoid: GCA 013153105 1
-
AAI clade 6-3
medoid: GCF 000223905 1
-
AAI clade 6-4
medoid: GCA 012798025 1
-
AAI clade 6-5
medoid: GCF 006740685 1
-
AAI clade 6-6
medoid: GCA 017935945 1
-
AAI clade 6-7
medoid: GCA 000690595 2
-
AAI clade 6-8
medoid: GCF 018228765 1
-
AAI clade 6-9
medoid: GCA 015521605 1
-
AAI clade 6-10
medoid: GCA 002506275 1
-
AAI clade 6-11
medoid: GCA 018396875 1
-
AAI clade 6-12
medoid: GCF 000969905 1
-
AAI clade 6-13
medoid: GCA 002067325 1
-
AAI clade 6-14
medoid: GCA 002762865 1
-
AAI clade 6-15
medoid: GCF 000025525 1
-
AAI clade 6-16
medoid: GCF 000025505 1
-
AAI clade 6-17
medoid: GCA 017608985 1
-
AAI clade 6-18
medoid: GCA 005878985 1
-
AAI clade 6-19
medoid: GCF 001017125 1
-
AAI clade 6-20
medoid: GCA 016840855 1
-
AAI clade 6-21
medoid: GCA 902560445 1
-
AAI clade 6-21-1
medoid: GCA 001628485 1
-
AAI clade 6-21-2
medoid: GCA 001875345 1
-
AAI clade 6-21-3
medoid: GCA 002504845 1
-
AAI clade 6-21-4
medoid: GCA 002712575 1
8 datasets: GCA 002172375 1 (AAI: 76.78%), GCA 002457145 1 (AAI: 67.53%), GCA 002503285 1 (AAI: 61.85%), GCA 002712575 1 (AAI: 100.0%), GCA 002719615 1 (AAI: 84.12%), GCA 002731195 1 (AAI: 73.71%), GCA 003602595 1 (AAI: 82.2%), and GCA 905182515 1 (AAI: 60.74%)
-
AAI clade 6-21-5
medoid: GCA 002498455 1
-
AAI clade 6-21-6
medoid: GCA 902560445 1
-
AAI clade 6-21-7
medoid: GCA 002457605 1
-
AAI clade 6-21-8
medoid: GCA 002498985 1
-
AAI clade 6-21-9
medoid: GCA 002501805 1
-
AAI clade 6-21-10
medoid: GCA 002497905 1
-
AAI clade 6-21-11
medoid: GCA 002726275 1
-
AAI clade 6-21-12
medoid: GCA 002702985 1
-
AAI clade 6-21-13
medoid: GCA 012959435 1
-
AAI clade 6-21-1
medoid: GCA 001628485 1
-
AAI clade 6-22
medoid: GCA 005881695 1
-
AAI clade 6-23
medoid: GCA 005222975 1
-
AAI clade 6-24
medoid: GCF 007826885 1
-
AAI clade 6-25
medoid: GCA 902784195 1
-
AAI clade 6-26
medoid: GCA 015062915 1
-
AAI clade 6-1
medoid: GCF 000336775 1
-
AAI clade 7
medoid: GCF 008638345 1
-
AAI clade 8
medoid: GCF 000807255 1
-
AAI clade 9
medoid: GCF 001050135 1
-
AAI clade 10
medoid: GCA 002717245 1
-
AAI clade 11
medoid: GCA 017478625 1
-
AAI clade 12
medoid: GCA 009773355 1
-
AAI clade 13
medoid: GCA 905200435 1
-
AAI clade 14
medoid: GCA 017516885 1
-
AAI clade 15
medoid: GCA 004321885 1
-
AAI clade 16
medoid: GCA 905236305 1
-
AAI clade 17
medoid: GCA 017648525 1
-
AAI clade 18
medoid: GCA 019113065 1
-
AAI clade 19
medoid: GCA 016795075 1
-
AAI clade 20
medoid: GCF 001467025 1
-
AAI clade 21
medoid: GCA 017642855 1
-
AAI clade 22
medoid: GCA 017408305 1
-
AAI clade 23
medoid: GCA 002436405 1