AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
    • AAI clade 6-1 medoid: GCF 000336775 1
    • AAI clade 6-2 medoid: GCA 013153105 1
    • AAI clade 6-3 medoid: GCF 000223905 1
    • AAI clade 6-4 medoid: GCA 012798025 1
    • AAI clade 6-5 medoid: GCF 006740685 1
    • AAI clade 6-6 medoid: GCA 017935945 1
    • AAI clade 6-7 medoid: GCA 000690595 2
    • AAI clade 6-8 medoid: GCF 018228765 1
    • AAI clade 6-9 medoid: GCA 015521605 1
    • AAI clade 6-10 medoid: GCA 002506275 1
    • AAI clade 6-11 medoid: GCA 018396875 1
      • AAI clade 6-11-1 medoid: GCA 015520425 1
      • AAI clade 6-11-2 medoid: GCA 000380705 1
      • AAI clade 6-11-3 medoid: GCA 016927015 1
      • AAI clade 6-11-4 medoid: GCA 014859755 1
      • AAI clade 6-11-5 medoid: GCA 003601725 1
      • AAI clade 6-11-6 medoid: GCA 001593855 1
      • AAI clade 6-11-7 medoid: GCA 001593865 1
      • AAI clade 6-11-8 medoid: GCA 018396515 1
      • AAI clade 6-11-9 medoid: GCA 001593935 1
      • AAI clade 6-11-10 medoid: GCA 004028775 1
      • AAI clade 6-11-11 medoid: GCA 017883585 1
      • AAI clade 6-11-12 medoid: GCA 013619005 1
      • AAI clade 6-11-13 medoid: GCA 002507245 1
      • AAI clade 6-11-14 medoid: GCA 003144275 1
      • AAI clade 6-11-15 medoid: GCA 001940665 1
      • AAI clade 6-11-16 medoid: GCA 001940725 1
      • AAI clade 6-11-17 medoid: GCA 001940755 1
      • AAI clade 6-11-18 medoid: GCA 003601605 1
      • AAI clade 6-11-19 medoid: GCA 015522055 1
      • AAI clade 6-11-20 medoid: GCA 002255025 1
      • AAI clade 6-11-21 medoid: GCA 017601225 1
      • AAI clade 6-11-22 medoid: GCA 018396875 1
      • AAI clade 6-11-23 medoid: GCA 014874415 1
      • AAI clade 6-11-24 medoid: GCA 009903795 1
      • AAI clade 6-11-25 medoid: GCA 016783485 1
      • AAI clade 6-11-26 medoid: GCA 003096255 1
      • AAI clade 6-11-27 medoid: GCA 003141855 1
      • AAI clade 6-11-28 medoid: GCA 005877225 1
      • AAI clade 6-11-29 medoid: GCA 003650625 1
      • AAI clade 6-11-30 medoid: GCA 003661265 1
      • AAI clade 6-11-31 medoid: GCA 014361095 1
      • AAI clade 6-11-32 medoid: GCA 014361445 1
      • AAI clade 6-11-33 medoid: GCA 013375405 1
      • AAI clade 6-11-34 medoid: GCA 009781395 1
      • AAI clade 6-11-35 medoid: GCA 015523605 1
      • AAI clade 6-11-36 medoid: GCA 013375355 1
      • AAI clade 6-11-37 medoid: GCA 011605715 1
      • AAI clade 6-11-38 medoid: GCA 011605775 1
      • AAI clade 6-11-39 medoid: GCA 019058165 1
      • AAI clade 6-11-40 medoid: GCA 016840485 1
      • AAI clade 6-11-41 medoid: GCA 016188965 1
      • AAI clade 6-11-42 medoid: GCA 019057385 1
      • AAI clade 6-11-43 medoid: GCA 016839995 1
      • AAI clade 6-11-44 medoid: GCA 016931555 1
      • AAI clade 6-11-45 medoid: GCA 018396975 1
      • AAI clade 6-11-46 medoid: GCA 018396435 1
      • AAI clade 6-11-47 medoid: GCA 018396815 1
        3 datasets: GCA 018396725 1 (AAI: 46.86%), GCA 018396775 1 (AAI: 61.37%), and GCA 018396815 1 (AAI: 100.0%)
      • AAI clade 6-11-48 medoid: GCA 018397055 1
    • AAI clade 6-12 medoid: GCF 000969905 1
    • AAI clade 6-13 medoid: GCA 002067325 1
    • AAI clade 6-14 medoid: GCA 002762865 1
    • AAI clade 6-15 medoid: GCF 000025525 1
    • AAI clade 6-16 medoid: GCF 000025505 1
    • AAI clade 6-17 medoid: GCA 017608985 1
    • AAI clade 6-18 medoid: GCA 005878985 1
    • AAI clade 6-19 medoid: GCF 001017125 1
    • AAI clade 6-20 medoid: GCA 016840855 1
    • AAI clade 6-21 medoid: GCA 902560445 1
    • AAI clade 6-22 medoid: GCA 005881695 1
    • AAI clade 6-23 medoid: GCA 005222975 1
    • AAI clade 6-24 medoid: GCF 007826885 1
    • AAI clade 6-25 medoid: GCA 902784195 1
    • AAI clade 6-26 medoid: GCA 015062915 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1