AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
    • AAI clade 6-1 medoid: GCF 000336775 1
    • AAI clade 6-2 medoid: GCA 013153105 1
    • AAI clade 6-3 medoid: GCF 000223905 1
    • AAI clade 6-4 medoid: GCA 012798025 1
    • AAI clade 6-5 medoid: GCF 006740685 1
    • AAI clade 6-6 medoid: GCA 017935945 1
    • AAI clade 6-7 medoid: GCA 000690595 2
    • AAI clade 6-8 medoid: GCF 018228765 1
    • AAI clade 6-9 medoid: GCA 015521605 1
    • AAI clade 6-10 medoid: GCA 002506275 1
      • AAI clade 6-10-1 medoid: GCA 003602645 1
      • AAI clade 6-10-2 medoid: GCA 002506275 1
      • AAI clade 6-10-3 medoid: GCA 016777125 1
      • AAI clade 6-10-4 medoid: GCA 003602575 1
      • AAI clade 6-10-5 medoid: GCA 002494645 1
      • AAI clade 6-10-6 medoid: GCA 013330155 1
      • AAI clade 6-10-7 medoid: GCA 013329865 1
      • AAI clade 6-10-8 medoid: GCA 002722135 1
      • AAI clade 6-10-9 medoid: GCA 002498185 1
        • AAI clade 6-10-9-1 medoid: GCA 002498185 1
        • AAI clade 6-10-9-2 medoid: GCA 002506705 1
        • AAI clade 6-10-9-3 medoid: GCA 002507425 1
        • AAI clade 6-10-9-4 medoid: GCA 003602535 1
        • AAI clade 6-10-9-5 medoid: GCA 002701145 1
          2 datasets: GCA 002701145 1 (AAI: 100.0%) and GCA 902605365 1 (AAI: 85.53%)
        • AAI clade 6-10-9-6 medoid: GCA 002706615 1
        • AAI clade 6-10-9-7 medoid: GCA 002707335 2
        • AAI clade 6-10-9-8 medoid: GCA 902563095 1
        • AAI clade 6-10-9-9 medoid: GCA 004195515 1
        • AAI clade 6-10-9-10 medoid: GCA 018650165 1
      • AAI clade 6-10-10 medoid: GCA 002692465 1
      • AAI clade 6-10-11 medoid: GCA 905182185 1
      • AAI clade 6-10-12 medoid: GCA 018623995 1
      • AAI clade 6-10-13 medoid: GCA 004195635 1
      • AAI clade 6-10-14 medoid: GCA 002505935 1
      • AAI clade 6-10-15 medoid: GCA 018659375 1
      • AAI clade 6-10-16 medoid: GCA 002719395 1
    • AAI clade 6-11 medoid: GCA 018396875 1
    • AAI clade 6-12 medoid: GCF 000969905 1
    • AAI clade 6-13 medoid: GCA 002067325 1
    • AAI clade 6-14 medoid: GCA 002762865 1
    • AAI clade 6-15 medoid: GCF 000025525 1
    • AAI clade 6-16 medoid: GCF 000025505 1
    • AAI clade 6-17 medoid: GCA 017608985 1
    • AAI clade 6-18 medoid: GCA 005878985 1
    • AAI clade 6-19 medoid: GCF 001017125 1
    • AAI clade 6-20 medoid: GCA 016840855 1
    • AAI clade 6-21 medoid: GCA 902560445 1
    • AAI clade 6-22 medoid: GCA 005881695 1
    • AAI clade 6-23 medoid: GCA 005222975 1
    • AAI clade 6-24 medoid: GCF 007826885 1
    • AAI clade 6-25 medoid: GCA 902784195 1
    • AAI clade 6-26 medoid: GCA 015062915 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1