AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
    • AAI clade 5-1 medoid: GCA 017449415 1
    • AAI clade 5-2 medoid: GCF 000381045 1
    • AAI clade 5-3 medoid: GCF 015206895 1
    • AAI clade 5-4 medoid: GCA 003280985 1
    • AAI clade 5-5 medoid: GCF 900142025 1
    • AAI clade 5-6 medoid: GCF 014205895 1
    • AAI clade 5-7 medoid: GCA 002747175 1
    • AAI clade 5-8 medoid: GCF 002532075 1
    • AAI clade 5-9 medoid: GCA 016179875 1
    • AAI clade 5-10 medoid: GCA 002869845 2
    • AAI clade 5-11 medoid: GCA 016235875 1
    • AAI clade 5-12 medoid: GCA 905612265 1
    • AAI clade 5-13 medoid: GCF 014201315 1
    • AAI clade 5-14 medoid: GCA 003167255 1
      • AAI clade 5-14-1 medoid: GCA 019233755 1
      • AAI clade 5-14-2 medoid: GCA 016871055 1
      • AAI clade 5-14-3 medoid: GCA 002298225 1
      • AAI clade 5-14-4 medoid: GCA 002327305 1
      • AAI clade 5-14-5 medoid: GCA 002433055 1
      • AAI clade 5-14-6 medoid: GCA 002898775 1
      • AAI clade 5-14-7 medoid: GCA 003167255 1
      • AAI clade 5-14-8 medoid: GCA 016185465 1
      • AAI clade 5-14-9 medoid: GCA 003142185 1
        2 datasets: GCA 003142185 1 (AAI: 100.0%) and GCA 003157745 1 (AAI: 68.08%)
      • AAI clade 5-14-10 medoid: GCA 003154855 1
      • AAI clade 5-14-11 medoid: GCA 003162425 1
      • AAI clade 5-14-12 medoid: GCA 902826605 1
      • AAI clade 5-14-13 medoid: GCA 014860455 1
      • AAI clade 5-14-14 medoid: GCA 902825945 1
      • AAI clade 5-14-15 medoid: GCA 009838515 1
      • AAI clade 5-14-16 medoid: GCA 010084195 1
      • AAI clade 5-14-17 medoid: GCA 014379815 1
      • AAI clade 5-14-18 medoid: GCA 014584705 1
      • AAI clade 5-14-19 medoid: GCA 014764485 1
      • AAI clade 5-14-20 medoid: GCA 016125275 1
      • AAI clade 5-14-21 medoid: GCA 016178155 1
      • AAI clade 5-14-22 medoid: GCA 016191085 1
      • AAI clade 5-14-23 medoid: GCA 019187195 1
      • AAI clade 5-14-24 medoid: GCA 016201185 1
      • AAI clade 5-14-25 medoid: GCA 016213755 1
      • AAI clade 5-14-26 medoid: GCA 016650215 1
      • AAI clade 5-14-27 medoid: GCA 016650235 1
      • AAI clade 5-14-28 medoid: GCA 017304135 1
      • AAI clade 5-14-29 medoid: GCA 016870915 1
      • AAI clade 5-14-30 medoid: GCA 016870995 1
      • AAI clade 5-14-31 medoid: GCA 900696665 1
      • AAI clade 5-14-32 medoid: GCA 903875575 1
      • AAI clade 5-14-33 medoid: GCA 903900705 1
      • AAI clade 5-14-34 medoid: GCA 903881085 1
    • AAI clade 5-15 medoid: GCA 013152765 1
    • AAI clade 5-16 medoid: GCA 009845545 1
    • AAI clade 5-17 medoid: GCF 003003925 1
    • AAI clade 5-18 medoid: GCA 016182975 1
    • AAI clade 5-19 medoid: GCA 015484715 1
    • AAI clade 5-20 medoid: GCA 017510075 1
    • AAI clade 5-21 medoid: GCA 015222205 1
    • AAI clade 5-22 medoid: GCA 013813355 1
    • AAI clade 5-23 medoid: GCA 016706275 1
    • AAI clade 5-24 medoid: GCA 003554615 1
    • AAI clade 5-25 medoid: GCA 003448875 1
    • AAI clade 5-26 medoid: GCA 017622235 1
    • AAI clade 5-27 medoid: GCA 001919715 1
    • AAI clade 5-28 medoid: GCA 017883385 1
    • AAI clade 5-29 medoid: GCA 001805765 1
    • AAI clade 5-30 medoid: GCF 002251945 1
    • AAI clade 5-31 medoid: GCA 005888435 1
    • AAI clade 5-32 medoid: GCA 003222055 1
    • AAI clade 5-33 medoid: GCA 005889085 1
    • AAI clade 5-34 medoid: GCA 016741895 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1