AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: GCA 017502845 1
-
AAI clade 2
medoid: GCA 002434265 1
-
AAI clade 3
medoid: GCA 013002175 1
-
AAI clade 4
medoid: GCA 900110395 1
-
AAI clade 4-1
medoid: GCF 017302985 1
-
AAI clade 4-2
medoid: GCF 002245955 1
-
AAI clade 4-3
medoid: GCF 900094625 1
-
AAI clade 4-4
medoid: GCA 009773055 1
-
AAI clade 4-5
medoid: GCF 900094605 1
-
AAI clade 4-6
medoid: GCF 004302915 1
-
AAI clade 4-7
medoid: GCF 018919395 1
-
AAI clade 4-8
medoid: GCA 902528415 1
-
AAI clade 4-9
medoid: GCF 004152845 1
-
AAI clade 4-9-1
medoid: GCF 004152845 1
-
AAI clade 4-9-2
medoid: GCF 900167915 1
-
AAI clade 4-9-2-1
medoid: GCA 000333335 1
-
AAI clade 4-9-2-2
medoid: GCF 014647255 1
-
AAI clade 4-9-2-3
medoid: GCA 002256005 1
-
AAI clade 4-9-2-4
medoid: GCA 003240855 1
-
AAI clade 4-9-2-5
medoid: GCF 000420765 1
-
AAI clade 4-9-2-6
medoid: GCA 002291855 1
-
AAI clade 4-9-2-7
medoid: GCA 002375465 1
-
AAI clade 4-9-2-8
medoid: GCA 002401455 1
-
AAI clade 4-9-2-9
medoid: GCA 002422945 1
-
AAI clade 4-9-2-10
medoid: GCA 002422985 1
-
AAI clade 4-9-2-11
medoid: GCA 003347635 1
-
AAI clade 4-9-2-12
medoid: GCF 900167915 1
-
AAI clade 4-9-2-13
medoid: GCA 005144965 1
-
AAI clade 4-9-2-14
medoid: GCA 903958285 1
3 datasets: GCA 005518185 1 (AAI: 77.73%), GCA 903839675 1 (AAI: 93.86%), and GCA 903958285 1 (AAI: 100.0%)
-
AAI clade 4-9-2-15
medoid: GCA 019232625 1
-
AAI clade 4-9-2-16
medoid: GCA 005883305 1
-
AAI clade 4-9-2-17
medoid: GCA 009920915 1
-
AAI clade 4-9-2-18
medoid: GCA 017640725 1
-
AAI clade 4-9-2-19
medoid: GCF 014195685 1
-
AAI clade 4-9-2-20
medoid: GCF 003385775 1
-
AAI clade 4-9-2-21
medoid: GCF 009720245 1
-
AAI clade 4-9-2-22
medoid: GCF 011302055 1
-
AAI clade 4-9-2-23
medoid: GCF 014489515 1
-
AAI clade 4-9-2-24
medoid: GCF 016025255 1
-
AAI clade 4-9-2-25
medoid: GCF 003634215 1
-
AAI clade 4-9-2-26
medoid: GCA 014238195 1
-
AAI clade 4-9-2-27
medoid: GCA 014380205 1
-
AAI clade 4-9-2-28
medoid: GCA 016704425 1
-
AAI clade 4-9-2-29
medoid: GCF 004135585 1
-
AAI clade 4-9-2-30
medoid: GCF 000974765 1
-
AAI clade 4-9-2-31
medoid: GCA 018982925 1
-
AAI clade 4-9-2-32
medoid: GCF 000383095 1
-
AAI clade 4-9-2-33
medoid: GCA 903642255 1
-
AAI clade 4-9-2-34
medoid: GCF 006715975 1
-
AAI clade 4-9-2-35
medoid: GCF 000342165 1
-
AAI clade 4-9-2-36
medoid: GCF 003583725 1
-
AAI clade 4-9-2-37
medoid: GCF 001890385 1
-
AAI clade 4-9-2-38
medoid: GCF 003034225 1
-
AAI clade 4-9-2-39
medoid: GCF 003499275 1
-
AAI clade 4-9-2-40
medoid: GCF 016924655 1
-
AAI clade 4-9-2-41
medoid: GCF 004005865 1
-
AAI clade 4-9-2-42
medoid: GCF 004681125 1
-
AAI clade 4-9-2-43
medoid: GCF 016464365 1
-
AAI clade 4-9-2-44
medoid: GCF 014117445 1
-
AAI clade 4-9-2-45
medoid: GCF 014656395 1
-
AAI clade 4-9-2-46
medoid: GCF 015240255 1
-
AAI clade 4-9-2-47
medoid: GCF 015354055 1
-
AAI clade 4-9-2-1
medoid: GCA 000333335 1
-
AAI clade 4-9-1
medoid: GCF 004152845 1
-
AAI clade 4-10
medoid: GCF 002858865 1
-
AAI clade 4-11
medoid: GCF 014204545 1
-
AAI clade 4-12
medoid: GCF 013035315 1
-
AAI clade 4-13
medoid: GCF 008932435 1
-
AAI clade 4-14
medoid: GCF 000262405 1
-
AAI clade 4-15
medoid: GCA 902595525 1
-
AAI clade 4-16
medoid: GCF 009696265 1
-
AAI clade 4-17
medoid: GCA 902793695 1
-
AAI clade 4-18
medoid: GCF 002215495 1
-
AAI clade 4-19
medoid: GCF 013170705 1
-
AAI clade 4-20
medoid: GCA 005503215 1
-
AAI clade 4-21
medoid: GCF 014358075 1
-
AAI clade 4-22
medoid: GCF 000743575 1
-
AAI clade 4-23
medoid: GCA 015062495 1
-
AAI clade 4-1
medoid: GCF 017302985 1
-
AAI clade 5
medoid: GCA 012798955 1
-
AAI clade 6
medoid: GCA 013415575 1
-
AAI clade 7
medoid: GCF 008638345 1
-
AAI clade 8
medoid: GCF 000807255 1
-
AAI clade 9
medoid: GCF 001050135 1
-
AAI clade 10
medoid: GCA 002717245 1
-
AAI clade 11
medoid: GCA 017478625 1
-
AAI clade 12
medoid: GCA 009773355 1
-
AAI clade 13
medoid: GCA 905200435 1
-
AAI clade 14
medoid: GCA 017516885 1
-
AAI clade 15
medoid: GCA 004321885 1
-
AAI clade 16
medoid: GCA 905236305 1
-
AAI clade 17
medoid: GCA 017648525 1
-
AAI clade 18
medoid: GCA 019113065 1
-
AAI clade 19
medoid: GCA 016795075 1
-
AAI clade 20
medoid: GCF 001467025 1
-
AAI clade 21
medoid: GCA 017642855 1
-
AAI clade 22
medoid: GCA 017408305 1
-
AAI clade 23
medoid: GCA 002436405 1