AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 4-1
medoid: GCF 017302985 1
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AAI clade 4-2
medoid: GCF 002245955 1
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AAI clade 4-3
medoid: GCF 900094625 1
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AAI clade 4-4
medoid: GCA 009773055 1
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AAI clade 4-5
medoid: GCF 900094605 1
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AAI clade 4-6
medoid: GCF 004302915 1
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AAI clade 4-6-1
medoid: GCF 003350405 1
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AAI clade 4-6-2
medoid: GCF 003696345 1
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AAI clade 4-6-3
medoid: GCA 018971455 1
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AAI clade 4-6-4
medoid: GCF 012927745 1
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AAI clade 4-6-5
medoid: GCA 903944925 1
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AAI clade 4-6-6
medoid: GCF 902712915 1
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AAI clade 4-6-7
medoid: GCA 018971565 1
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AAI clade 4-6-8
medoid: GCF 000193495 2
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AAI clade 4-6-9
medoid: GCA 903918315 1
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AAI clade 4-6-10
medoid: GCF 002723955 1
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AAI clade 4-6-11
medoid: GCF 014764365 1
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AAI clade 4-6-12
medoid: GCF 017377715 1
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AAI clade 4-6-13
medoid: GCF 002631185 1
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AAI clade 4-6-14
medoid: GCA 016869735 1
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AAI clade 4-6-15
medoid: GCF 000723785 2
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AAI clade 4-6-16
medoid: GCF 002153655 1
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AAI clade 4-6-17
medoid: GCF 000802185 1
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AAI clade 4-6-18
medoid: GCF 009834365 1
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AAI clade 4-6-19
medoid: GCF 001580675 1
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AAI clade 4-6-20
medoid: GCF 002003665 1
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AAI clade 4-6-21
medoid: GCF 000378465 1
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AAI clade 4-6-22
medoid: GCF 900465345 1
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AAI clade 4-6-23
medoid: GCF 002153605 1
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AAI clade 4-6-23-1
medoid: GCF 002153605 1
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AAI clade 4-6-23-2
medoid: GCF 001580995 1
5 datasets: GCF 000963925 1 (AAI: 75.92%), GCF 000963945 1 (AAI: 82.33%), GCF 000963965 1 (AAI: 76.0%), GCF 001580915 1 (AAI: 92.36%), and GCF 001580995 1 (AAI: 100.0%)
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AAI clade 4-6-23-3
medoid: GCF 011516655 1
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AAI clade 4-6-23-1
medoid: GCF 002153605 1
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AAI clade 4-6-24
medoid: GCF 016107305 1
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AAI clade 4-6-25
medoid: GCF 002906255 1
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AAI clade 4-6-26
medoid: GCF 016805305 1
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AAI clade 4-6-1
medoid: GCF 003350405 1
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AAI clade 4-7
medoid: GCF 018919395 1
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AAI clade 4-8
medoid: GCA 902528415 1
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AAI clade 4-9
medoid: GCF 004152845 1
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AAI clade 4-10
medoid: GCF 002858865 1
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AAI clade 4-11
medoid: GCF 014204545 1
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AAI clade 4-12
medoid: GCF 013035315 1
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AAI clade 4-13
medoid: GCF 008932435 1
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AAI clade 4-14
medoid: GCF 000262405 1
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AAI clade 4-15
medoid: GCA 902595525 1
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AAI clade 4-16
medoid: GCF 009696265 1
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AAI clade 4-17
medoid: GCA 902793695 1
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AAI clade 4-18
medoid: GCF 002215495 1
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AAI clade 4-19
medoid: GCF 013170705 1
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AAI clade 4-20
medoid: GCA 005503215 1
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AAI clade 4-21
medoid: GCF 014358075 1
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AAI clade 4-22
medoid: GCF 000743575 1
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AAI clade 4-23
medoid: GCA 015062495 1
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AAI clade 4-1
medoid: GCF 017302985 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1