AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: GCA 017502845 1
-
AAI clade 2
medoid: GCA 002434265 1
-
AAI clade 3
medoid: GCA 013002175 1
-
AAI clade 4
medoid: GCA 900110395 1
-
AAI clade 4-1
medoid: GCF 017302985 1
-
AAI clade 4-2
medoid: GCF 002245955 1
-
AAI clade 4-3
medoid: GCF 900094625 1
-
AAI clade 4-4
medoid: GCA 009773055 1
-
AAI clade 4-5
medoid: GCF 900094605 1
-
AAI clade 4-5-1
medoid: GCF 900094605 1
-
AAI clade 4-5-1-1
medoid: GCF 900094605 1
-
AAI clade 4-5-1-2
medoid: GCF 000384335 2
-
AAI clade 4-5-1-3
medoid: GCA 900110395 1
-
AAI clade 4-5-1-4
medoid: GCF 018390555 1
-
AAI clade 4-5-1-5
medoid: GCA 017307355 1
-
AAI clade 4-5-1-5-1
medoid: GCA 016201105 1
-
AAI clade 4-5-1-5-2
medoid: GCA 009693985 1
-
AAI clade 4-5-1-5-3
medoid: GCA 015654715 1
-
AAI clade 4-5-1-5-4
medoid: GCA 017307355 1
6 datasets: GCA 017307315 1 (AAI: 71.34%), GCA 017307355 1 (AAI: 100.0%), GCA 902825865 1 (AAI: 62.29%), GCA 903857685 1 (AAI: 63.65%), GCA 903897605 1 (AAI: 73.2%), and GCA 903922545 1 (AAI: 60.41%)
-
AAI clade 4-5-1-5-1
medoid: GCA 016201105 1
-
AAI clade 4-5-1-1
medoid: GCF 900094605 1
-
AAI clade 4-5-2
medoid: GCF 015291625 1
-
AAI clade 4-5-1
medoid: GCF 900094605 1
-
AAI clade 4-6
medoid: GCF 004302915 1
-
AAI clade 4-7
medoid: GCF 018919395 1
-
AAI clade 4-8
medoid: GCA 902528415 1
-
AAI clade 4-9
medoid: GCF 004152845 1
-
AAI clade 4-10
medoid: GCF 002858865 1
-
AAI clade 4-11
medoid: GCF 014204545 1
-
AAI clade 4-12
medoid: GCF 013035315 1
-
AAI clade 4-13
medoid: GCF 008932435 1
-
AAI clade 4-14
medoid: GCF 000262405 1
-
AAI clade 4-15
medoid: GCA 902595525 1
-
AAI clade 4-16
medoid: GCF 009696265 1
-
AAI clade 4-17
medoid: GCA 902793695 1
-
AAI clade 4-18
medoid: GCF 002215495 1
-
AAI clade 4-19
medoid: GCF 013170705 1
-
AAI clade 4-20
medoid: GCA 005503215 1
-
AAI clade 4-21
medoid: GCF 014358075 1
-
AAI clade 4-22
medoid: GCF 000743575 1
-
AAI clade 4-23
medoid: GCA 015062495 1
-
AAI clade 4-1
medoid: GCF 017302985 1
-
AAI clade 5
medoid: GCA 012798955 1
-
AAI clade 6
medoid: GCA 013415575 1
-
AAI clade 7
medoid: GCF 008638345 1
-
AAI clade 8
medoid: GCF 000807255 1
-
AAI clade 9
medoid: GCF 001050135 1
-
AAI clade 10
medoid: GCA 002717245 1
-
AAI clade 11
medoid: GCA 017478625 1
-
AAI clade 12
medoid: GCA 009773355 1
-
AAI clade 13
medoid: GCA 905200435 1
-
AAI clade 14
medoid: GCA 017516885 1
-
AAI clade 15
medoid: GCA 004321885 1
-
AAI clade 16
medoid: GCA 905236305 1
-
AAI clade 17
medoid: GCA 017648525 1
-
AAI clade 18
medoid: GCA 019113065 1
-
AAI clade 19
medoid: GCA 016795075 1
-
AAI clade 20
medoid: GCF 001467025 1
-
AAI clade 21
medoid: GCA 017642855 1
-
AAI clade 22
medoid: GCA 017408305 1
-
AAI clade 23
medoid: GCA 002436405 1