AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 4-1
medoid: GCF 017302985 1
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AAI clade 4-2
medoid: GCF 002245955 1
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AAI clade 4-3
medoid: GCF 900094625 1
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AAI clade 4-4
medoid: GCA 009773055 1
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AAI clade 4-4-1
medoid: GCF 002020135 1
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AAI clade 4-4-2
medoid: GCA 902540655 1
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AAI clade 4-4-3
medoid: GCA 017599285 1
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AAI clade 4-4-4
medoid: GCF 000763885 1
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AAI clade 4-4-5
medoid: GCF 011059185 1
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AAI clade 4-4-6
medoid: GCA 007131945 1
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AAI clade 4-4-7
medoid: GCF 001294535 1
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AAI clade 4-4-8
medoid: GCA 002084505 1
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AAI clade 4-4-9
medoid: GCA 002683015 1
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AAI clade 4-4-10
medoid: GCA 011523445 1
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AAI clade 4-4-11
medoid: GCA 009773055 1
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AAI clade 4-4-12
medoid: GCA 002280515 1
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AAI clade 4-4-13
medoid: GCF 003697785 1
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AAI clade 4-4-14
medoid: GCA 002317305 1
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AAI clade 4-4-15
medoid: GCA 016765235 1
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AAI clade 4-4-16
medoid: GCA 016765435 1
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AAI clade 4-4-17
medoid: GCF 009908165 1
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AAI clade 4-4-18
medoid: GCF 000021865 1
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AAI clade 4-4-19
medoid: GCF 004022265 1
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AAI clade 4-4-20
medoid: GCA 014239455 1
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AAI clade 4-4-21
medoid: GCF 006385685 1
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AAI clade 4-4-22
medoid: GCA 902533755 1
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AAI clade 4-4-23
medoid: GCA 016765135 1
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AAI clade 4-4-24
medoid: GCA 015231375 1
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AAI clade 4-4-25
medoid: GCF 013387475 1
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AAI clade 4-4-26
medoid: GCA 003551745 1
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AAI clade 4-4-27
medoid: GCA 003220905 1
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AAI clade 4-4-28
medoid: GCF 900102885 1
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AAI clade 4-4-29
medoid: GCA 003241595 1
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AAI clade 4-4-30
medoid: GCF 006151785 1
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AAI clade 4-4-31
medoid: GCA 006226415 1
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AAI clade 4-4-32
medoid: GCF 003054195 1
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AAI clade 4-4-33
medoid: GCF 000420745 1
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AAI clade 4-4-34
medoid: GCF 004366635 1
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AAI clade 4-4-35
medoid: GCA 015488115 1
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AAI clade 4-4-36
medoid: GCA 003963235 1
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AAI clade 4-4-37
medoid: GCF 011308835 1
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AAI clade 4-4-38
medoid: GCF 900113695 1
6 datasets: GCA 007693835 1 (AAI: 54.7%), GCF 000374145 1 (AAI: 50.31%), GCF 016623495 1 (AAI: 55.37%), GCF 900106695 1 (AAI: 64.13%), GCF 900107585 1 (AAI: 54.68%), and GCF 900113695 1 (AAI: 100.0%)
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AAI clade 4-4-39
medoid: GCF 002196855 1
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AAI clade 4-4-40
medoid: GCA 009785175 1
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AAI clade 4-4-41
medoid: GCA 903873585 1
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AAI clade 4-4-42
medoid: GCF 003399445 1
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AAI clade 4-4-43
medoid: GCA 013361335 1
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AAI clade 4-4-44
medoid: GCF 900105075 1
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AAI clade 4-4-45
medoid: GCA 015232865 1
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AAI clade 4-4-46
medoid: GCF 002117445 1
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AAI clade 4-4-47
medoid: GCA 016866815 1
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AAI clade 4-4-48
medoid: GCF 002900965 1
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AAI clade 4-4-49
medoid: GCA 017555325 1
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AAI clade 4-4-50
medoid: GCA 018651345 1
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AAI clade 4-4-51
medoid: GCA 902611605 1
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AAI clade 4-4-52
medoid: GCA 902586885 1
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AAI clade 4-4-53
medoid: GCF 003122215 1
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AAI clade 4-4-54
medoid: GCF 003259195 1
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AAI clade 4-4-55
medoid: GCF 004054105 1
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AAI clade 4-4-56
medoid: GCF 017916275 1
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AAI clade 4-4-57
medoid: GCF 004015795 1
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AAI clade 4-4-58
medoid: GCF 017315735 1
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AAI clade 4-4-1
medoid: GCF 002020135 1
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AAI clade 4-5
medoid: GCF 900094605 1
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AAI clade 4-6
medoid: GCF 004302915 1
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AAI clade 4-7
medoid: GCF 018919395 1
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AAI clade 4-8
medoid: GCA 902528415 1
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AAI clade 4-9
medoid: GCF 004152845 1
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AAI clade 4-10
medoid: GCF 002858865 1
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AAI clade 4-11
medoid: GCF 014204545 1
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AAI clade 4-12
medoid: GCF 013035315 1
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AAI clade 4-13
medoid: GCF 008932435 1
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AAI clade 4-14
medoid: GCF 000262405 1
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AAI clade 4-15
medoid: GCA 902595525 1
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AAI clade 4-16
medoid: GCF 009696265 1
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AAI clade 4-17
medoid: GCA 902793695 1
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AAI clade 4-18
medoid: GCF 002215495 1
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AAI clade 4-19
medoid: GCF 013170705 1
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AAI clade 4-20
medoid: GCA 005503215 1
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AAI clade 4-21
medoid: GCF 014358075 1
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AAI clade 4-22
medoid: GCF 000743575 1
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AAI clade 4-23
medoid: GCA 015062495 1
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AAI clade 4-1
medoid: GCF 017302985 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1