AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 4-1
medoid: GCF 017302985 1
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AAI clade 4-2
medoid: GCF 002245955 1
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AAI clade 4-3
medoid: GCF 900094625 1
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AAI clade 4-4
medoid: GCA 009773055 1
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AAI clade 4-5
medoid: GCF 900094605 1
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AAI clade 4-6
medoid: GCF 004302915 1
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AAI clade 4-7
medoid: GCF 018919395 1
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AAI clade 4-8
medoid: GCA 902528415 1
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AAI clade 4-9
medoid: GCF 004152845 1
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AAI clade 4-10
medoid: GCF 002858865 1
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AAI clade 4-11
medoid: GCF 014204545 1
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AAI clade 4-12
medoid: GCF 013035315 1
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AAI clade 4-13
medoid: GCF 008932435 1
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AAI clade 4-14
medoid: GCF 000262405 1
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AAI clade 4-15
medoid: GCA 902595525 1
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AAI clade 4-16
medoid: GCF 009696265 1
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AAI clade 4-17
medoid: GCA 902793695 1
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AAI clade 4-18
medoid: GCF 002215495 1
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AAI clade 4-19
medoid: GCF 013170705 1
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AAI clade 4-20
medoid: GCA 005503215 1
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AAI clade 4-21
medoid: GCF 014358075 1
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AAI clade 4-21-1
medoid: GCA 001464615 1
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AAI clade 4-21-2
medoid: GCF 013344685 1
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AAI clade 4-21-3
medoid: GCA 002403415 1
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AAI clade 4-21-4
medoid: GCF 001557215 1
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AAI clade 4-21-5
medoid: GCF 013409985 1
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AAI clade 4-21-6
medoid: GCA 902806265 1
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AAI clade 4-21-7
medoid: GCF 003171655 1
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AAI clade 4-21-8
medoid: GCF 004340945 1
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AAI clade 4-21-8-1
medoid: GCF 014358075 1
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AAI clade 4-21-8-2
medoid: GCF 004340965 1
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AAI clade 4-21-8-2-1
medoid: GCF 004340965 1
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AAI clade 4-21-8-2-1-1
medoid: GCF 004340965 1
7 datasets: GCF 001421415 1 (AAI: 96.66%), GCF 001421745 1 (AAI: 96.8%), GCF 003050745 1 (AAI: 96.42%), GCF 003053745 1 (AAI: 97.09%), GCF 003610375 1 (AAI: 97.23%), GCF 004340965 1 (AAI: 100.0%), and GCF 004795835 1 (AAI: 96.7%)
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AAI clade 4-21-8-2-1-2
medoid: GCF 003688625 1
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AAI clade 4-21-8-2-1-1
medoid: GCF 004340965 1
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AAI clade 4-21-8-2-2
medoid: GCF 013374115 1
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AAI clade 4-21-8-2-1
medoid: GCF 004340965 1
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AAI clade 4-21-8-3
medoid: GCF 001421505 1
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AAI clade 4-21-8-4
medoid: GCF 001421535 1
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AAI clade 4-21-8-5
medoid: GCF 007995065 1
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AAI clade 4-21-8-6
medoid: GCF 903642285 1
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AAI clade 4-21-8-1
medoid: GCF 014358075 1
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AAI clade 4-21-9
medoid: GCF 001421765 1
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AAI clade 4-21-10
medoid: GCF 014199415 1
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AAI clade 4-21-11
medoid: GCF 001428865 1
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AAI clade 4-21-12
medoid: GCF 007859635 1
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AAI clade 4-21-13
medoid: GCF 014490665 1
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AAI clade 4-21-14
medoid: GCA 016937575 1
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AAI clade 4-21-15
medoid: GCF 011761945 1
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AAI clade 4-21-16
medoid: GCF 002091475 1
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AAI clade 4-21-17
medoid: GCF 014199595 1
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AAI clade 4-21-18
medoid: GCF 903644055 1
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AAI clade 4-21-19
medoid: GCF 006439055 1
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AAI clade 4-21-20
medoid: GCF 900109565 1
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AAI clade 4-21-21
medoid: GCF 002351485 1
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AAI clade 4-21-22
medoid: GCF 900109205 1
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AAI clade 4-21-23
medoid: GCF 016427505 1
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AAI clade 4-21-24
medoid: GCF 014193845 1
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AAI clade 4-21-25
medoid: GCF 004135605 1
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AAI clade 4-21-26
medoid: GCF 001598415 1
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AAI clade 4-21-27
medoid: GCF 001717955 1
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AAI clade 4-21-28
medoid: GCF 001956315 1
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AAI clade 4-21-29
medoid: GCF 014199625 1
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AAI clade 4-21-1
medoid: GCA 001464615 1
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AAI clade 4-22
medoid: GCF 000743575 1
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AAI clade 4-23
medoid: GCA 015062495 1
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AAI clade 4-1
medoid: GCF 017302985 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1