AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
-
AAI clade 1
medoid: GCA 017502845 1
-
AAI clade 2
medoid: GCA 002434265 1
-
AAI clade 3
medoid: GCA 013002175 1
-
AAI clade 4
medoid: GCA 900110395 1
-
AAI clade 4-1
medoid: GCF 017302985 1
-
AAI clade 4-2
medoid: GCF 002245955 1
-
AAI clade 4-3
medoid: GCF 900094625 1
-
AAI clade 4-4
medoid: GCA 009773055 1
-
AAI clade 4-5
medoid: GCF 900094605 1
-
AAI clade 4-6
medoid: GCF 004302915 1
-
AAI clade 4-7
medoid: GCF 018919395 1
-
AAI clade 4-8
medoid: GCA 902528415 1
-
AAI clade 4-9
medoid: GCF 004152845 1
-
AAI clade 4-10
medoid: GCF 002858865 1
-
AAI clade 4-11
medoid: GCF 014204545 1
-
AAI clade 4-11-1
medoid: GCA 002434505 1
-
AAI clade 4-11-2
medoid: GCF 000421705 1
-
AAI clade 4-11-3
medoid: GCF 017086445 1
8 datasets: GCA 000335735 1 (AAI: 95.63%), GCF 000813765 1 (AAI: 95.4%), GCF 001592205 1 (AAI: 97.12%), GCF 004614235 1 (AAI: 83.03%), GCF 005484585 1 (AAI: 95.53%), GCF 014204545 1 (AAI: 96.59%), GCF 017086445 1 (AAI: 100.0%), and GCF 902506205 1 (AAI: 84.37%)
-
AAI clade 4-11-4
medoid: GCA 001794825 1
-
AAI clade 4-11-5
medoid: GCF 014199955 1
-
AAI clade 4-11-6
medoid: GCF 001295975 1
-
AAI clade 4-11-7
medoid: GCF 000144605 1
-
AAI clade 4-11-8
medoid: GCA 002292165 1
-
AAI clade 4-11-9
medoid: GCA 002483305 1
-
AAI clade 4-11-10
medoid: GCF 000204035 1
-
AAI clade 4-11-11
medoid: GCF 002979535 1
-
AAI clade 4-11-12
medoid: GCA 002432125 1
-
AAI clade 4-11-13
medoid: GCA 003241825 1
-
AAI clade 4-11-14
medoid: GCF 014202075 1
-
AAI clade 4-11-15
medoid: GCA 013693835 1
-
AAI clade 4-11-16
medoid: GCA 013823285 1
-
AAI clade 4-11-17
medoid: GCF 014196335 1
-
AAI clade 4-11-18
medoid: GCA 016463485 1
-
AAI clade 4-11-19
medoid: GCF 003730275 1
-
AAI clade 4-11-20
medoid: GCA 017302105 1
-
AAI clade 4-11-21
medoid: GCA 017302335 1
-
AAI clade 4-11-22
medoid: GCA 018608325 1
-
AAI clade 4-11-23
medoid: GCA 018820205 1
-
AAI clade 4-11-24
medoid: GCF 003934285 1
-
AAI clade 4-11-25
medoid: GCF 001424025 1
-
AAI clade 4-11-26
medoid: GCF 003704105 1
-
AAI clade 4-11-27
medoid: GCF 016656965 1
-
AAI clade 4-11-1
medoid: GCA 002434505 1
-
AAI clade 4-12
medoid: GCF 013035315 1
-
AAI clade 4-13
medoid: GCF 008932435 1
-
AAI clade 4-14
medoid: GCF 000262405 1
-
AAI clade 4-15
medoid: GCA 902595525 1
-
AAI clade 4-16
medoid: GCF 009696265 1
-
AAI clade 4-17
medoid: GCA 902793695 1
-
AAI clade 4-18
medoid: GCF 002215495 1
-
AAI clade 4-19
medoid: GCF 013170705 1
-
AAI clade 4-20
medoid: GCA 005503215 1
-
AAI clade 4-21
medoid: GCF 014358075 1
-
AAI clade 4-22
medoid: GCF 000743575 1
-
AAI clade 4-23
medoid: GCA 015062495 1
-
AAI clade 4-1
medoid: GCF 017302985 1
-
AAI clade 5
medoid: GCA 012798955 1
-
AAI clade 6
medoid: GCA 013415575 1
-
AAI clade 7
medoid: GCF 008638345 1
-
AAI clade 8
medoid: GCF 000807255 1
-
AAI clade 9
medoid: GCF 001050135 1
-
AAI clade 10
medoid: GCA 002717245 1
-
AAI clade 11
medoid: GCA 017478625 1
-
AAI clade 12
medoid: GCA 009773355 1
-
AAI clade 13
medoid: GCA 905200435 1
-
AAI clade 14
medoid: GCA 017516885 1
-
AAI clade 15
medoid: GCA 004321885 1
-
AAI clade 16
medoid: GCA 905236305 1
-
AAI clade 17
medoid: GCA 017648525 1
-
AAI clade 18
medoid: GCA 019113065 1
-
AAI clade 19
medoid: GCA 016795075 1
-
AAI clade 20
medoid: GCF 001467025 1
-
AAI clade 21
medoid: GCA 017642855 1
-
AAI clade 22
medoid: GCA 017408305 1
-
AAI clade 23
medoid: GCA 002436405 1