AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
    • AAI clade 4-1 medoid: GCF 017302985 1
    • AAI clade 4-2 medoid: GCF 002245955 1
    • AAI clade 4-3 medoid: GCF 900094625 1
    • AAI clade 4-4 medoid: GCA 009773055 1
    • AAI clade 4-5 medoid: GCF 900094605 1
    • AAI clade 4-6 medoid: GCF 004302915 1
    • AAI clade 4-7 medoid: GCF 018919395 1
    • AAI clade 4-8 medoid: GCA 902528415 1
    • AAI clade 4-9 medoid: GCF 004152845 1
    • AAI clade 4-10 medoid: GCF 002858865 1
      • AAI clade 4-10-1 medoid: GCF 002858865 1
      • AAI clade 4-10-2 medoid: GCA 017991675 1
      • AAI clade 4-10-3 medoid: GCA 018222605 1
      • AAI clade 4-10-4 medoid: GCA 001464425 1
      • AAI clade 4-10-5 medoid: GCF 000685315 1
      • AAI clade 4-10-6 medoid: GCF 016817355 1
        • AAI clade 4-10-6-1 medoid: GCF 000152745 1
        • AAI clade 4-10-6-2 medoid: GCA 002704915 1
        • AAI clade 4-10-6-3 medoid: GCA 002692855 1
        • AAI clade 4-10-6-4 medoid: GCF 016817355 1
        • AAI clade 4-10-6-5 medoid: GCA 002707795 1
          2 datasets: GCA 002707795 1 (AAI: 100.0%) and GCA 017642925 1 (AAI: 95.07%)
        • AAI clade 4-10-6-6 medoid: GCA 002733605 1
        • AAI clade 4-10-6-7 medoid: GCA 002733485 1
        • AAI clade 4-10-6-8 medoid: GCA 002733805 1
        • AAI clade 4-10-6-9 medoid: GCF 003129605 1
        • AAI clade 4-10-6-10 medoid: GCA 013002305 1
        • AAI clade 4-10-6-11 medoid: GCA 013151255 1
        • AAI clade 4-10-6-12 medoid: GCA 013389075 1
        • AAI clade 4-10-6-13 medoid: GCA 014324115 1
        • AAI clade 4-10-6-14 medoid: GCF 003634045 1
        • AAI clade 4-10-6-15 medoid: GCF 008630495 1
        • AAI clade 4-10-6-16 medoid: GCA 016125425 1
        • AAI clade 4-10-6-17 medoid: GCA 017643585 1
        • AAI clade 4-10-6-18 medoid: GCA 905477785 1
        • AAI clade 4-10-6-19 medoid: GCF 000382325 1
        • AAI clade 4-10-6-20 medoid: GCF 000412185 1
        • AAI clade 4-10-6-21 medoid: GCF 017161425 1
        • AAI clade 4-10-6-22 medoid: GCF 003634015 1
        • AAI clade 4-10-6-23 medoid: GCF 004000605 1
        • AAI clade 4-10-6-24 medoid: GCF 014652695 1
      • AAI clade 4-10-7 medoid: GCF 003576245 1
      • AAI clade 4-10-8 medoid: GCF 000420665 1
      • AAI clade 4-10-9 medoid: GCF 000495795 1
    • AAI clade 4-11 medoid: GCF 014204545 1
    • AAI clade 4-12 medoid: GCF 013035315 1
    • AAI clade 4-13 medoid: GCF 008932435 1
    • AAI clade 4-14 medoid: GCF 000262405 1
    • AAI clade 4-15 medoid: GCA 902595525 1
    • AAI clade 4-16 medoid: GCF 009696265 1
    • AAI clade 4-17 medoid: GCA 902793695 1
    • AAI clade 4-18 medoid: GCF 002215495 1
    • AAI clade 4-19 medoid: GCF 013170705 1
    • AAI clade 4-20 medoid: GCA 005503215 1
    • AAI clade 4-21 medoid: GCF 014358075 1
    • AAI clade 4-22 medoid: GCF 000743575 1
    • AAI clade 4-23 medoid: GCA 015062495 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1