AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
    • AAI clade 3-1 medoid: GCF 014451325 1
    • AAI clade 3-2 medoid: GCF 000308435 1
    • AAI clade 3-3 medoid: GCF 002155905 1
      • AAI clade 3-3-1 medoid: GCF 002155905 1
        • AAI clade 3-3-1-1 medoid: GCF 001419765 1
        • AAI clade 3-3-1-2 medoid: GCF 015163075 1
        • AAI clade 3-3-1-3 medoid: GCF 017526105 1
        • AAI clade 3-3-1-4 medoid: GCF 900110735 1
        • AAI clade 3-3-1-5 medoid: GCF 000262345 1
        • AAI clade 3-3-1-6 medoid: GCF 001513955 1
        • AAI clade 3-3-1-7 medoid: GCF 014534645 1
        • AAI clade 3-3-1-8 medoid: GCF 012273515 1
        • AAI clade 3-3-1-9 medoid: GCF 000980885 2
        • AAI clade 3-3-1-10 medoid: GCF 004784465 1
        • AAI clade 3-3-1-11 medoid: GCF 000349325 1
        • AAI clade 3-3-1-12 medoid: GCA 000719105 1
        • AAI clade 3-3-1-13 medoid: GCF 001184025 1
        • AAI clade 3-3-1-14 medoid: GCF 006715395 1
        • AAI clade 3-3-1-15 medoid: GCA 002128465 1
        • AAI clade 3-3-1-16 medoid: GCF 900110255 1
        • AAI clade 3-3-1-17 medoid: GCF 004028635 1
        • AAI clade 3-3-1-18 medoid: GCA 014656015 1
        • AAI clade 3-3-1-19 medoid: GCF 007176755 1
        • AAI clade 3-3-1-20 medoid: GCF 016612545 1
        • AAI clade 3-3-1-21 medoid: GCA 019243445 1
        • AAI clade 3-3-1-22 medoid: GCF 002300165 1
        • AAI clade 3-3-1-23 medoid: GCF 003144095 1
        • AAI clade 3-3-1-24 medoid: GCF 001419795 1
        • AAI clade 3-3-1-25 medoid: GCF 000373625 1
        • AAI clade 3-3-1-26 medoid: GCF 014650655 1
        • AAI clade 3-3-1-27 medoid: GCF 000497445 1
        • AAI clade 3-3-1-28 medoid: GCF 000725495 1
        • AAI clade 3-3-1-29 medoid: GCF 000725885 1
        • AAI clade 3-3-1-30 medoid: GCF 002217755 1
        • AAI clade 3-3-1-31 medoid: GCF 002920635 1
        • AAI clade 3-3-1-32 medoid: GCF 002242805 1
        • AAI clade 3-3-1-33 medoid: GCF 001514125 1
        • AAI clade 3-3-1-34 medoid: GCF 001514205 1
        • AAI clade 3-3-1-35 medoid: GCF 001543895 1
        • AAI clade 3-3-1-36 medoid: GCF 003865135 1
        • AAI clade 3-3-1-37 medoid: GCF 001642695 1
        • AAI clade 3-3-1-38 medoid: GCF 001642995 1
        • AAI clade 3-3-1-39 medoid: GCF 001746365 1
        • AAI clade 3-3-1-40 medoid: GCF 001879105 1
        • AAI clade 3-3-1-41 medoid: GCF 001896135 2
        • AAI clade 3-3-1-42 medoid: GCF 002803075 1
        • AAI clade 3-3-1-43 medoid: GCF 003579925 1
        • AAI clade 3-3-1-44 medoid: GCF 003626535 1
        • AAI clade 3-3-1-45 medoid: GCF 004348315 1
          2 datasets: GCF 004348315 1 (AAI: 100.0%) and GCF 004348415 1 (AAI: 79.35%)
        • AAI clade 3-3-1-46 medoid: GCF 900091845 1
        • AAI clade 3-3-1-47 medoid: GCF 006539505 1
        • AAI clade 3-3-1-48 medoid: GCF 009377235 1
        • AAI clade 3-3-1-49 medoid: GCF 011421595 1
        • AAI clade 3-3-1-50 medoid: GCF 014621695 1
        • AAI clade 3-3-1-51 medoid: GCF 016741785 1
        • AAI clade 3-3-1-52 medoid: GCF 900188405 1
      • AAI clade 3-3-2 medoid: GCF 900236475 1
    • AAI clade 3-4 medoid: GCF 012317045 1
    • AAI clade 3-5 medoid: GCF 003725545 1
    • AAI clade 3-6 medoid: GCF 001836165 1
    • AAI clade 3-7 medoid: GCF 000342005 1
    • AAI clade 3-8 medoid: GCF 000014565 1
    • AAI clade 3-9 medoid: GCF 018224615 1
    • AAI clade 3-10 medoid: GCF 001667735 1
    • AAI clade 3-11 medoid: GCF 006539945 1
    • AAI clade 3-12 medoid: GCF 018613675 1
    • AAI clade 3-13 medoid: GCF 001942045 1
    • AAI clade 3-14 medoid: GCF 900323885 1
    • AAI clade 3-15 medoid: GCA 018375675 1
    • AAI clade 3-16 medoid: GCA 013911515 1
    • AAI clade 3-17 medoid: GCA 902611225 1
    • AAI clade 3-18 medoid: GCF 002288185 1
    • AAI clade 3-19 medoid: GCA 902576605 1
    • AAI clade 3-20 medoid: GCF 014191495 1
    • AAI clade 3-21 medoid: GCF 900143215 1
    • AAI clade 3-22 medoid: GCF 014646815 1
    • AAI clade 3-23 medoid: GCA 900770865 1
    • AAI clade 3-24 medoid: GCF 014805525 1
    • AAI clade 3-25 medoid: GCA 003158855 1
    • AAI clade 3-26 medoid: GCA 013813955 1
    • AAI clade 3-27 medoid: GCF 000092985 1
    • AAI clade 3-28 medoid: GCF 008327685 1
    • AAI clade 3-29 medoid: GCF 001007995 1
    • AAI clade 3-30 medoid: GCF 001806325 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1