AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 3-1
medoid: GCF 014451325 1
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AAI clade 3-2
medoid: GCF 000308435 1
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AAI clade 3-3
medoid: GCF 002155905 1
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AAI clade 3-4
medoid: GCF 012317045 1
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AAI clade 3-5
medoid: GCF 003725545 1
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AAI clade 3-6
medoid: GCF 001836165 1
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AAI clade 3-7
medoid: GCF 000342005 1
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AAI clade 3-8
medoid: GCF 000014565 1
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AAI clade 3-9
medoid: GCF 018224615 1
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AAI clade 3-10
medoid: GCF 001667735 1
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AAI clade 3-11
medoid: GCF 006539945 1
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AAI clade 3-12
medoid: GCF 018613675 1
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AAI clade 3-13
medoid: GCF 001942045 1
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AAI clade 3-14
medoid: GCF 900323885 1
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AAI clade 3-15
medoid: GCA 018375675 1
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AAI clade 3-16
medoid: GCA 013911515 1
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AAI clade 3-17
medoid: GCA 902611225 1
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AAI clade 3-18
medoid: GCF 002288185 1
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AAI clade 3-19
medoid: GCA 902576605 1
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AAI clade 3-20
medoid: GCF 014191495 1
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AAI clade 3-21
medoid: GCF 900143215 1
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AAI clade 3-22
medoid: GCF 014646815 1
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AAI clade 3-23
medoid: GCA 900770865 1
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AAI clade 3-24
medoid: GCF 014805525 1
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AAI clade 3-25
medoid: GCA 003158855 1
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AAI clade 3-26
medoid: GCA 013813955 1
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AAI clade 3-27
medoid: GCF 000092985 1
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AAI clade 3-28
medoid: GCF 008327685 1
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AAI clade 3-28-1
medoid: GCF 014873935 1
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AAI clade 3-28-2
medoid: GCA 003001795 1
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AAI clade 3-28-3
medoid: GCA 003140115 1
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AAI clade 3-28-4
medoid: GCA 003161205 1
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AAI clade 3-28-5
medoid: GCA 003164955 1
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AAI clade 3-28-6
medoid: GCA 003168215 1
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AAI clade 3-28-7
medoid: GCA 003168255 1
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AAI clade 3-28-8
medoid: GCA 003168295 1
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AAI clade 3-28-9
medoid: GCA 003541285 1
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AAI clade 3-28-10
medoid: GCA 003553565 1
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AAI clade 3-28-11
medoid: GCA 003553795 1
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AAI clade 3-28-12
medoid: GCA 005884515 1
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AAI clade 3-28-13
medoid: GCA 009379825 1
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AAI clade 3-28-14
medoid: GCA 009379955 1
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AAI clade 3-28-15
medoid: GCA 009379995 1
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AAI clade 3-28-16
medoid: GCA 009380095 1
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AAI clade 3-28-17
medoid: GCA 009784565 1
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AAI clade 3-28-18
medoid: GCA 016208485 1
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AAI clade 3-28-19
medoid: GCA 016209025 1
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AAI clade 3-28-20
medoid: GCA 017354375 1
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AAI clade 3-28-21
medoid: GCA 017354575 1
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AAI clade 3-28-22
medoid: GCA 017882645 1
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AAI clade 3-28-23
medoid: GCA 018335555 1
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AAI clade 3-28-24
medoid: GCA 019239875 1
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AAI clade 3-28-25
medoid: GCA 019239975 1
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AAI clade 3-28-26
medoid: GCA 019240215 1
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AAI clade 3-28-27
medoid: GCA 019245115 1
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AAI clade 3-28-28
medoid: GCF 000015025 1
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AAI clade 3-28-29
medoid: GCF 000024385 1
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AAI clade 3-28-30
medoid: GCF 000374305 1
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AAI clade 3-28-31
medoid: GCF 009831215 1
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AAI clade 3-28-32
medoid: GCF 003696215 1
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AAI clade 3-28-33
medoid: GCF 900659615 1
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AAI clade 3-28-34
medoid: GCF 008085905 1
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AAI clade 3-28-35
medoid: GCF 005889745 1
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AAI clade 3-28-36
medoid: GCF 001552635 1
3 datasets: GCF 001552175 1 (AAI: 72.8%), GCF 001552635 1 (AAI: 100.0%), and GCF 009604375 1 (AAI: 72.27%)
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AAI clade 3-28-37
medoid: GCF 003751225 1
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AAI clade 3-28-38
medoid: GCF 003073135 1
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AAI clade 3-28-39
medoid: GCF 003074135 1
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AAI clade 3-28-40
medoid: GCF 003289645 1
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AAI clade 3-28-41
medoid: GCF 003386555 1
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AAI clade 3-28-42
medoid: GCF 003634705 1
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AAI clade 3-28-43
medoid: GCF 003589885 1
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AAI clade 3-28-44
medoid: GCF 014648675 1
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AAI clade 3-28-45
medoid: GCF 004348535 1
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AAI clade 3-28-46
medoid: GCF 013409045 1
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AAI clade 3-28-47
medoid: GCF 006716425 1
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AAI clade 3-28-48
medoid: GCF 007827045 1
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AAI clade 3-28-49
medoid: GCF 008923185 1
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AAI clade 3-28-50
medoid: GCF 008923365 1
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AAI clade 3-28-51
medoid: GCF 014323665 1
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AAI clade 3-28-1
medoid: GCF 014873935 1
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AAI clade 3-29
medoid: GCF 001007995 1
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AAI clade 3-30
medoid: GCF 001806325 1
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AAI clade 3-1
medoid: GCF 014451325 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1