AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 21-1
medoid: GCA 902606175 1
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AAI clade 21-2
medoid: GCA 012961165 1
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AAI clade 21-3
medoid: GCA 902619265 1
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AAI clade 21-4
medoid: GCA 002684495 1
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AAI clade 21-5
medoid: GCA 902613475 1
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AAI clade 21-6
medoid: GCA 002313255 1
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AAI clade 21-7
medoid: GCA 002389265 1
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AAI clade 21-8
medoid: GCA 902587545 1
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AAI clade 21-9
medoid: GCA 018645765 1
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AAI clade 21-9-1
medoid: GCA 016779565 1
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AAI clade 21-9-2
medoid: GCA 012960535 1
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AAI clade 21-9-3
medoid: GCA 002728935 1
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AAI clade 21-9-4
medoid: GCA 007127015 1
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AAI clade 21-9-5
medoid: GCA 018645765 1
4 datasets: GCA 017854255 1 (AAI: 87.75%), GCA 018645765 1 (AAI: 100.0%), GCA 018647445 1 (AAI: 85.07%), and GCA 905182155 1 (AAI: 74.89%)
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AAI clade 21-9-6
medoid: GCA 018666555 1
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AAI clade 21-9-1
medoid: GCA 016779565 1
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AAI clade 21-10
medoid: GCA 902553145 1
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AAI clade 21-11
medoid: GCA 902560315 1
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AAI clade 21-12
medoid: GCA 902527995 1
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AAI clade 21-13
medoid: GCA 902727935 1
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AAI clade 21-14
medoid: GCA 012267385 1
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AAI clade 21-15
medoid: GCA 902556355 1
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AAI clade 21-16
medoid: GCA 902614235 1
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AAI clade 21-1
medoid: GCA 902606175 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1