AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 2-1
medoid: GCF 014770435 1
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AAI clade 2-2
medoid: GCF 000765825 2
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AAI clade 2-3
medoid: GCA 003028315 1
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AAI clade 2-4
medoid: GCF 900636545 1
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AAI clade 2-5
medoid: GCF 009831415 1
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AAI clade 2-6
medoid: GCF 016599715 1
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AAI clade 2-7
medoid: GCF 009176645 1
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AAI clade 2-8
medoid: GCF 002221525 1
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AAI clade 2-9
medoid: GCF 000210895 1
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AAI clade 2-10
medoid: GCA 003250495 1
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AAI clade 2-11
medoid: GCF 005497185 1
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AAI clade 2-12
medoid: GCF 001579805 1
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AAI clade 2-13
medoid: GCF 003048405 1
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AAI clade 2-14
medoid: GCF 000817815 1
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AAI clade 2-15
medoid: GCF 000730665 1
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AAI clade 2-16
medoid: GCF 013376875 1
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AAI clade 2-17
medoid: GCF 001557875 1
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AAI clade 2-18
medoid: GCA 002840125 1
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AAI clade 2-19
medoid: GCF 018599185 1
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AAI clade 2-20
medoid: GCA 903873045 1
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AAI clade 2-21
medoid: GCF 900092655 1
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AAI clade 2-22
medoid: GCF 902497845 1
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AAI clade 2-23
medoid: GCF 000013645 1
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AAI clade 2-24
medoid: GCF 000820225 1
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AAI clade 2-25
medoid: GCF 001718835 1
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AAI clade 2-26
medoid: GCF 000745325 1
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AAI clade 2-27
medoid: GCF 000217915 1
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AAI clade 2-28
medoid: GCF 900496965 1
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AAI clade 2-29
medoid: GCF 000282135 1
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AAI clade 2-30
medoid: GCF 017303155 1
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AAI clade 2-31
medoid: GCA 014762765 1
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AAI clade 2-32
medoid: GCA 016845205 1
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AAI clade 2-33
medoid: GCF 004342485 1
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AAI clade 2-33-1
medoid: GCA 016213205 1
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AAI clade 2-33-2
medoid: GCF 002930615 1
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AAI clade 2-33-3
medoid: GCF 004016505 1
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AAI clade 2-33-4
medoid: GCA 001464195 1
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AAI clade 2-33-5
medoid: GCF 000190375 1
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AAI clade 2-33-6
medoid: GCA 005502875 1
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AAI clade 2-33-7
medoid: GCA 001770775 1
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AAI clade 2-33-8
medoid: GCF 005403045 1
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AAI clade 2-33-9
medoid: GCA 002205125 1
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AAI clade 2-33-10
medoid: GCF 002885975 1
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AAI clade 2-33-11
medoid: GCA 019112875 1
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AAI clade 2-33-12
medoid: GCF 017795745 1
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AAI clade 2-33-13
medoid: GCF 002205845 1
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AAI clade 2-33-14
medoid: GCA 003265685 1
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AAI clade 2-33-15
medoid: GCF 000768065 1
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AAI clade 2-33-16
medoid: GCF 018069865 1
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AAI clade 2-33-17
medoid: GCA 013824165 1
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AAI clade 2-33-18
medoid: GCA 009925955 1
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AAI clade 2-33-19
medoid: GCA 902825995 1
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AAI clade 2-33-20
medoid: GCA 016709385 1
3 datasets: GCA 011391855 1 (AAI: 77.64%), GCA 014859905 1 (AAI: 73.69%), and GCA 016709385 1 (AAI: 100.0%)
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AAI clade 2-33-21
medoid: GCA 011525985 1
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AAI clade 2-33-22
medoid: GCF 900089495 1
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AAI clade 2-33-23
medoid: GCA 013289985 1
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AAI clade 2-33-24
medoid: GCA 013299175 1
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AAI clade 2-33-25
medoid: GCA 013817345 1
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AAI clade 2-33-26
medoid: GCA 014378415 1
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AAI clade 2-33-27
medoid: GCF 001425705 1
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AAI clade 2-33-28
medoid: GCF 018069755 1
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AAI clade 2-33-29
medoid: GCA 016223165 1
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AAI clade 2-33-30
medoid: GCF 008329925 1
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AAI clade 2-33-31
medoid: GCA 017302505 1
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AAI clade 2-33-32
medoid: GCF 002028405 1
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AAI clade 2-33-33
medoid: GCF 016093275 1
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AAI clade 2-33-34
medoid: GCA 018780645 1
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AAI clade 2-33-35
medoid: GCA 903938815 1
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AAI clade 2-33-36
medoid: GCF 001425905 1
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AAI clade 2-33-37
medoid: GCF 001425785 1
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AAI clade 2-33-38
medoid: GCF 003852425 1
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AAI clade 2-33-39
medoid: GCF 004362855 1
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AAI clade 2-33-40
medoid: GCF 008801845 1
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AAI clade 2-33-41
medoid: GCF 000430725 1
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AAI clade 2-33-42
medoid: GCF 003387155 1
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AAI clade 2-33-43
medoid: GCF 900142965 1
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AAI clade 2-33-44
medoid: GCF 014145335 1
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AAI clade 2-33-1
medoid: GCA 016213205 1
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AAI clade 2-34
medoid: GCA 902509555 1
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AAI clade 2-35
medoid: GCF 900094595 1
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AAI clade 2-36
medoid: GCF 013177635 1
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AAI clade 2-37
medoid: GCF 005117025 1
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AAI clade 2-38
medoid: GCF 003202035 1
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AAI clade 2-39
medoid: GCF 018882415 1
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AAI clade 2-40
medoid: GCF 000744605 1
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AAI clade 2-41
medoid: GCA 017983615 1
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AAI clade 2-42
medoid: GCF 000219565 1
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AAI clade 2-43
medoid: GCA 016192435 1
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AAI clade 2-44
medoid: GCA 002340305 1
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AAI clade 2-45
medoid: GCF 002138415 1
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AAI clade 2-46
medoid: GCF 000773965 1
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AAI clade 2-47
medoid: GCF 000987835 1
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AAI clade 2-48
medoid: GCA 016183575 1
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AAI clade 2-49
medoid: GCF 000814845 2
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AAI clade 2-50
medoid: GCA 001899305 1
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AAI clade 2-51
medoid: GCF 000012325 1
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AAI clade 2-52
medoid: GCF 018336955 1
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AAI clade 2-53
medoid: GCF 900156155 1
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AAI clade 2-54
medoid: GCF 009795885 1
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AAI clade 2-1
medoid: GCF 014770435 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1