AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 2-1
medoid: GCF 014770435 1
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AAI clade 2-2
medoid: GCF 000765825 2
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AAI clade 2-3
medoid: GCA 003028315 1
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AAI clade 2-4
medoid: GCF 900636545 1
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AAI clade 2-5
medoid: GCF 009831415 1
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AAI clade 2-6
medoid: GCF 016599715 1
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AAI clade 2-7
medoid: GCF 009176645 1
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AAI clade 2-8
medoid: GCF 002221525 1
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AAI clade 2-9
medoid: GCF 000210895 1
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AAI clade 2-10
medoid: GCA 003250495 1
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AAI clade 2-11
medoid: GCF 005497185 1
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AAI clade 2-12
medoid: GCF 001579805 1
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AAI clade 2-13
medoid: GCF 003048405 1
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AAI clade 2-14
medoid: GCF 000817815 1
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AAI clade 2-15
medoid: GCF 000730665 1
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AAI clade 2-16
medoid: GCF 013376875 1
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AAI clade 2-17
medoid: GCF 001557875 1
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AAI clade 2-18
medoid: GCA 002840125 1
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AAI clade 2-19
medoid: GCF 018599185 1
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AAI clade 2-20
medoid: GCA 903873045 1
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AAI clade 2-20-1
medoid: GCA 903873045 1
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AAI clade 2-20-1-1
medoid: GCA 018830325 1
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AAI clade 2-20-1-2
medoid: GCA 001901525 1
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AAI clade 2-20-1-3
medoid: GCA 002134785 1
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AAI clade 2-20-1-4
medoid: GCA 903873045 1
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AAI clade 2-20-1-5
medoid: GCA 012959695 1
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AAI clade 2-20-1-6
medoid: GCA 002299495 1
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AAI clade 2-20-1-7
medoid: GCA 002352345 1
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AAI clade 2-20-1-8
medoid: GCA 002352385 1
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AAI clade 2-20-1-9
medoid: GCF 000190755 2
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AAI clade 2-20-1-10
medoid: GCA 002470825 1
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AAI clade 2-20-1-11
medoid: GCA 002483425 1
3 datasets: GCA 002483425 1 (AAI: 100.0%), GCA 016715325 1 (AAI: 66.49%), and GCA 016874115 1 (AAI: 63.38%)
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AAI clade 2-20-1-12
medoid: GCA 002928495 1
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AAI clade 2-20-1-13
medoid: GCA 009695535 1
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AAI clade 2-20-1-14
medoid: GCA 903953455 1
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AAI clade 2-20-1-15
medoid: GCA 903934035 1
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AAI clade 2-20-1-16
medoid: GCA 003864535 1
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AAI clade 2-20-1-17
medoid: GCF 002923755 1
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AAI clade 2-20-1-18
medoid: GCF 900163745 1
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AAI clade 2-20-1-19
medoid: GCA 005779525 1
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AAI clade 2-20-1-20
medoid: GCA 009922685 1
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AAI clade 2-20-1-21
medoid: GCA 013112535 1
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AAI clade 2-20-1-22
medoid: GCA 013139345 1
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AAI clade 2-20-1-23
medoid: GCA 013141155 1
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AAI clade 2-20-1-24
medoid: GCA 903847275 1
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AAI clade 2-20-1-25
medoid: GCA 016207405 1
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AAI clade 2-20-1-26
medoid: GCA 018333785 1
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AAI clade 2-20-1-27
medoid: GCA 018667355 1
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AAI clade 2-20-1-28
medoid: GCA 018672285 1
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AAI clade 2-20-1-29
medoid: GCA 902559815 1
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AAI clade 2-20-1-30
medoid: GCA 902590435 1
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AAI clade 2-20-1-31
medoid: GCA 902624655 1
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AAI clade 2-20-1-32
medoid: GCA 903859415 1
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AAI clade 2-20-1-33
medoid: GCA 903870545 1
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AAI clade 2-20-1-34
medoid: GCA 903938485 1
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AAI clade 2-20-1-35
medoid: GCA 903875455 1
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AAI clade 2-20-1-36
medoid: GCA 903927955 1
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AAI clade 2-20-1-37
medoid: GCA 903934875 1
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AAI clade 2-20-1-38
medoid: GCF 000733855 1
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AAI clade 2-20-1-39
medoid: GCF 000427625 1
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AAI clade 2-20-1-40
medoid: GCF 009498235 1
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AAI clade 2-20-1-41
medoid: GCF 900128525 1
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AAI clade 2-20-1-1
medoid: GCA 018830325 1
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AAI clade 2-20-2
medoid: GCF 016865255 1
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AAI clade 2-20-1
medoid: GCA 903873045 1
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AAI clade 2-21
medoid: GCF 900092655 1
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AAI clade 2-22
medoid: GCF 902497845 1
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AAI clade 2-23
medoid: GCF 000013645 1
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AAI clade 2-24
medoid: GCF 000820225 1
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AAI clade 2-25
medoid: GCF 001718835 1
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AAI clade 2-26
medoid: GCF 000745325 1
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AAI clade 2-27
medoid: GCF 000217915 1
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AAI clade 2-28
medoid: GCF 900496965 1
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AAI clade 2-29
medoid: GCF 000282135 1
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AAI clade 2-30
medoid: GCF 017303155 1
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AAI clade 2-31
medoid: GCA 014762765 1
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AAI clade 2-32
medoid: GCA 016845205 1
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AAI clade 2-33
medoid: GCF 004342485 1
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AAI clade 2-34
medoid: GCA 902509555 1
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AAI clade 2-35
medoid: GCF 900094595 1
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AAI clade 2-36
medoid: GCF 013177635 1
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AAI clade 2-37
medoid: GCF 005117025 1
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AAI clade 2-38
medoid: GCF 003202035 1
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AAI clade 2-39
medoid: GCF 018882415 1
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AAI clade 2-40
medoid: GCF 000744605 1
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AAI clade 2-41
medoid: GCA 017983615 1
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AAI clade 2-42
medoid: GCF 000219565 1
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AAI clade 2-43
medoid: GCA 016192435 1
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AAI clade 2-44
medoid: GCA 002340305 1
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AAI clade 2-45
medoid: GCF 002138415 1
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AAI clade 2-46
medoid: GCF 000773965 1
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AAI clade 2-47
medoid: GCF 000987835 1
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AAI clade 2-48
medoid: GCA 016183575 1
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AAI clade 2-49
medoid: GCF 000814845 2
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AAI clade 2-50
medoid: GCA 001899305 1
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AAI clade 2-51
medoid: GCF 000012325 1
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AAI clade 2-52
medoid: GCF 018336955 1
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AAI clade 2-53
medoid: GCF 900156155 1
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AAI clade 2-54
medoid: GCF 009795885 1
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AAI clade 2-1
medoid: GCF 014770435 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1