AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 2-1
medoid: GCF 014770435 1
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AAI clade 2-2
medoid: GCF 000765825 2
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AAI clade 2-3
medoid: GCA 003028315 1
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AAI clade 2-4
medoid: GCF 900636545 1
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AAI clade 2-5
medoid: GCF 009831415 1
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AAI clade 2-6
medoid: GCF 016599715 1
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AAI clade 2-7
medoid: GCF 009176645 1
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AAI clade 2-8
medoid: GCF 002221525 1
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AAI clade 2-9
medoid: GCF 000210895 1
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AAI clade 2-10
medoid: GCA 003250495 1
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AAI clade 2-11
medoid: GCF 005497185 1
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AAI clade 2-12
medoid: GCF 001579805 1
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AAI clade 2-12-1
medoid: GCF 000263715 2
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AAI clade 2-12-2
medoid: GCA 002839415 1
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AAI clade 2-12-3
medoid: GCA 003235325 1
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AAI clade 2-12-4
medoid: GCA 006212015 1
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AAI clade 2-12-5
medoid: GCA 012960105 1
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AAI clade 2-12-6
medoid: GCA 013288455 1
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AAI clade 2-12-7
medoid: GCA 014378195 1
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AAI clade 2-12-8
medoid: GCA 015163815 1
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AAI clade 2-12-9
medoid: GCA 016711335 1
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AAI clade 2-12-10
medoid: GCA 016937595 1
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AAI clade 2-12-11
medoid: GCA 902727945 1
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AAI clade 2-12-12
medoid: GCA 903870015 1
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AAI clade 2-12-13
medoid: GCF 000257395 1
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AAI clade 2-12-14
medoid: GCF 000282975 1
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AAI clade 2-12-15
medoid: GCF 003852405 1
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AAI clade 2-12-16
medoid: GCF 001579805 1
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AAI clade 2-12-17
medoid: GCF 002563895 1
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AAI clade 2-12-18
medoid: GCF 003626995 1
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AAI clade 2-12-19
medoid: GCF 001050345 1
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AAI clade 2-12-20
medoid: GCF 001186335 1
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AAI clade 2-12-21
medoid: GCF 001269925 1
4 datasets: GCF 001269925 1 (AAI: 100.0%), GCF 007858185 1 (AAI: 98.51%), GCF 014207255 1 (AAI: 98.35%), and GCF 900105325 1 (AAI: 98.01%)
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AAI clade 2-12-22
medoid: GCF 001439695 1
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AAI clade 2-12-23
medoid: GCF 001439785 1
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AAI clade 2-12-24
medoid: GCF 002934065 1
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AAI clade 2-12-25
medoid: GCF 001645105 1
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AAI clade 2-12-26
medoid: GCF 900215245 1
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AAI clade 2-12-27
medoid: GCF 001708445 1
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AAI clade 2-12-28
medoid: GCF 001870435 1
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AAI clade 2-12-29
medoid: GCF 002204795 1
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AAI clade 2-12-30
medoid: GCF 001983175 1
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AAI clade 2-12-31
medoid: GCF 002022265 1
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AAI clade 2-12-32
medoid: GCF 002251635 1
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AAI clade 2-12-33
medoid: GCF 013385985 1
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AAI clade 2-12-34
medoid: GCF 002843605 1
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AAI clade 2-12-35
medoid: GCF 900105735 1
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AAI clade 2-12-36
medoid: GCF 900583165 1
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AAI clade 2-12-37
medoid: GCF 003031675 1
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AAI clade 2-12-38
medoid: GCF 003052265 1
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AAI clade 2-12-39
medoid: GCF 003852235 1
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AAI clade 2-12-40
medoid: GCF 004682055 1
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AAI clade 2-12-41
medoid: GCF 013385965 1
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AAI clade 2-12-42
medoid: GCF 007858255 1
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AAI clade 2-12-43
medoid: GCF 008369295 1
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AAI clade 2-12-44
medoid: GCF 009296165 1
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AAI clade 2-12-45
medoid: GCF 009707325 1
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AAI clade 2-12-46
medoid: GCF 009707515 1
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AAI clade 2-12-47
medoid: GCF 013778505 1
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AAI clade 2-12-48
medoid: GCF 010092425 1
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AAI clade 2-12-49
medoid: GCF 012935695 1
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AAI clade 2-12-50
medoid: GCF 013403585 1
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AAI clade 2-12-51
medoid: GCF 013522705 1
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AAI clade 2-12-52
medoid: GCF 015163715 1
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AAI clade 2-12-53
medoid: GCF 016925675 1
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AAI clade 2-12-54
medoid: GCF 018614655 1
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AAI clade 2-12-55
medoid: GCF 019139815 1
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AAI clade 2-12-56
medoid: GCF 900102035 1
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AAI clade 2-12-57
medoid: GCF 900106045 1
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AAI clade 2-12-58
medoid: GCF 900580675 1
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AAI clade 2-12-1
medoid: GCF 000263715 2
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AAI clade 2-13
medoid: GCF 003048405 1
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AAI clade 2-14
medoid: GCF 000817815 1
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AAI clade 2-15
medoid: GCF 000730665 1
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AAI clade 2-16
medoid: GCF 013376875 1
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AAI clade 2-17
medoid: GCF 001557875 1
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AAI clade 2-18
medoid: GCA 002840125 1
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AAI clade 2-19
medoid: GCF 018599185 1
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AAI clade 2-20
medoid: GCA 903873045 1
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AAI clade 2-21
medoid: GCF 900092655 1
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AAI clade 2-22
medoid: GCF 902497845 1
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AAI clade 2-23
medoid: GCF 000013645 1
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AAI clade 2-24
medoid: GCF 000820225 1
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AAI clade 2-25
medoid: GCF 001718835 1
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AAI clade 2-26
medoid: GCF 000745325 1
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AAI clade 2-27
medoid: GCF 000217915 1
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AAI clade 2-28
medoid: GCF 900496965 1
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AAI clade 2-29
medoid: GCF 000282135 1
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AAI clade 2-30
medoid: GCF 017303155 1
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AAI clade 2-31
medoid: GCA 014762765 1
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AAI clade 2-32
medoid: GCA 016845205 1
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AAI clade 2-33
medoid: GCF 004342485 1
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AAI clade 2-34
medoid: GCA 902509555 1
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AAI clade 2-35
medoid: GCF 900094595 1
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AAI clade 2-36
medoid: GCF 013177635 1
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AAI clade 2-37
medoid: GCF 005117025 1
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AAI clade 2-38
medoid: GCF 003202035 1
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AAI clade 2-39
medoid: GCF 018882415 1
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AAI clade 2-40
medoid: GCF 000744605 1
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AAI clade 2-41
medoid: GCA 017983615 1
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AAI clade 2-42
medoid: GCF 000219565 1
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AAI clade 2-43
medoid: GCA 016192435 1
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AAI clade 2-44
medoid: GCA 002340305 1
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AAI clade 2-45
medoid: GCF 002138415 1
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AAI clade 2-46
medoid: GCF 000773965 1
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AAI clade 2-47
medoid: GCF 000987835 1
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AAI clade 2-48
medoid: GCA 016183575 1
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AAI clade 2-49
medoid: GCF 000814845 2
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AAI clade 2-50
medoid: GCA 001899305 1
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AAI clade 2-51
medoid: GCF 000012325 1
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AAI clade 2-52
medoid: GCF 018336955 1
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AAI clade 2-53
medoid: GCF 900156155 1
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AAI clade 2-54
medoid: GCF 009795885 1
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AAI clade 2-1
medoid: GCF 014770435 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1