AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 19-1
medoid: GCF 901538265 1
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AAI clade 19-2
medoid: GCA 005223045 1
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AAI clade 19-3
medoid: GCA 003485185 1
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AAI clade 19-4
medoid: GCF 007746075 1
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AAI clade 19-5
medoid: GCA 002839495 1
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AAI clade 19-6
medoid: GCF 011064595 1
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AAI clade 19-7
medoid: GCA 011048645 1
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AAI clade 19-8
medoid: GCA 013911165 1
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AAI clade 19-9
medoid: GCA 002690755 1
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AAI clade 19-10
medoid: GCA 004213555 1
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AAI clade 19-11
medoid: GCA 007127495 1
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AAI clade 19-12
medoid: GCA 018970045 1
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AAI clade 19-13
medoid: GCA 002295885 1
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AAI clade 19-14
medoid: GCA 002303765 1
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AAI clade 19-15
medoid: GCA 002337545 1
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AAI clade 19-16
medoid: GCA 015200345 1
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AAI clade 19-17
medoid: GCA 017303555 1
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AAI clade 19-18
medoid: GCA 016794425 1
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AAI clade 19-19
medoid: GCA 002698965 1
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AAI clade 19-20
medoid: GCF 008329715 1
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AAI clade 19-20-1
medoid: GCA 002359185 1
6 datasets: GCA 002359185 1 (AAI: 100.0%), GCA 014584345 1 (AAI: 57.19%), GCA 016765335 1 (AAI: 54.7%), GCA 017795105 1 (AAI: 60.85%), GCF 000165715 2 (AAI: 57.38%), and GCF 007859715 1 (AAI: 81.79%)
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AAI clade 19-20-2
medoid: GCF 007750395 1
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AAI clade 19-20-3
medoid: GCF 008298035 1
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AAI clade 19-20-4
medoid: GCA 002722955 1
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AAI clade 19-20-5
medoid: GCA 002724315 1
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AAI clade 19-20-6
medoid: GCF 007747795 1
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AAI clade 19-20-7
medoid: GCA 003508595 1
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AAI clade 19-20-8
medoid: GCA 003669125 1
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AAI clade 19-20-9
medoid: GCA 003669575 1
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AAI clade 19-20-10
medoid: GCA 003696385 1
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AAI clade 19-20-11
medoid: GCA 005778225 1
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AAI clade 19-20-12
medoid: GCA 007744515 1
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AAI clade 19-20-13
medoid: GCA 009691905 1
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AAI clade 19-20-14
medoid: GCA 013151585 1
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AAI clade 19-20-15
medoid: GCA 016779365 1
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AAI clade 19-20-16
medoid: GCA 013813775 1
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AAI clade 19-20-17
medoid: GCA 014762625 1
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AAI clade 19-20-18
medoid: GCA 016235885 1
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AAI clade 19-20-19
medoid: GCA 016795125 1
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AAI clade 19-20-20
medoid: GCF 007744255 1
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AAI clade 19-20-21
medoid: GCA 018699955 1
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AAI clade 19-20-22
medoid: GCA 900299185 1
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AAI clade 19-20-23
medoid: GCF 001610835 1
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AAI clade 19-20-24
medoid: GCF 007743815 1
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AAI clade 19-20-25
medoid: GCF 007744675 1
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AAI clade 19-20-26
medoid: GCF 007745175 1
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AAI clade 19-20-27
medoid: GCF 007860075 1
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AAI clade 19-20-28
medoid: GCF 008329715 1
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AAI clade 19-20-29
medoid: GCF 011634775 1
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AAI clade 19-20-30
medoid: GCF 900113665 1
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AAI clade 19-20-1
medoid: GCA 002359185 1
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AAI clade 19-21
medoid: GCA 003696625 1
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AAI clade 19-22
medoid: GCA 016200155 1
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AAI clade 19-23
medoid: GCA 003670825 1
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AAI clade 19-24
medoid: GCA 003513555 1
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AAI clade 19-25
medoid: GCA 002704825 1
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AAI clade 19-26
medoid: GCA 903892045 1
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AAI clade 19-27
medoid: GCA 014238415 1
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AAI clade 19-28
medoid: GCA 018701395 1
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AAI clade 19-29
medoid: GCA 905477565 1
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AAI clade 19-30
medoid: GCF 007748115 1
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AAI clade 19-31
medoid: GCA 903898755 1
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AAI clade 19-32
medoid: GCA 903930765 1
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AAI clade 19-33
medoid: GCA 903914415 1
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AAI clade 19-34
medoid: GCF 000196115 1
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AAI clade 19-35
medoid: GCA 017466305 1
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AAI clade 19-36
medoid: GCA 903896675 1
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AAI clade 19-37
medoid: GCA 903891095 1
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AAI clade 19-38
medoid: GCA 903899985 1
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AAI clade 19-39
medoid: GCA 016873335 1
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AAI clade 19-40
medoid: GCF 002289565 1
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AAI clade 19-41
medoid: GCA 017652805 1
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AAI clade 19-42
medoid: GCF 001707835 1
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AAI clade 19-43
medoid: GCA 017939795 1
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AAI clade 19-44
medoid: GCA 017407125 1
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AAI clade 19-1
medoid: GCF 901538265 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1