AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 17-1
medoid: GCA 017409765 1
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AAI clade 17-2
medoid: GCA 002449145 1
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AAI clade 17-3
medoid: GCA 003533505 1
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AAI clade 17-4
medoid: GCA 017453045 1
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AAI clade 17-5
medoid: GCA 014799575 1
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AAI clade 17-5-1
medoid: GCA 002070965 1
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AAI clade 17-5-2
medoid: GCA 015055975 1
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AAI clade 17-5-3
medoid: GCA 013316135 1
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AAI clade 17-5-4
medoid: GCA 014799575 1
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AAI clade 17-5-5
medoid: GCA 015055665 1
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AAI clade 17-5-6
medoid: GCA 017504305 1
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AAI clade 17-5-7
medoid: GCA 018716085 1
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AAI clade 17-5-8
medoid: GCA 910584035 1
6 datasets: GCA 910577795 1 (AAI: 71.31%), GCA 910577845 1 (AAI: 94.31%), GCA 910583995 1 (AAI: 72.13%), GCA 910584035 1 (AAI: 100.0%), GCA 910584975 1 (AAI: 73.45%), and GCA 910588545 1 (AAI: 71.83%)
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AAI clade 17-5-9
medoid: GCA 910587685 1
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AAI clade 17-5-1
medoid: GCA 002070965 1
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AAI clade 17-6
medoid: GCA 017615495 1
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AAI clade 17-7
medoid: GCA 017503265 1
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AAI clade 17-8
medoid: GCA 017482415 1
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AAI clade 17-9
medoid: GCA 900761675 1
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AAI clade 17-10
medoid: GCA 900547645 1
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AAI clade 17-11
medoid: GCA 910577055 1
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AAI clade 17-1
medoid: GCA 017409765 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1