AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 15-1
medoid: GCA 001872265 1
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AAI clade 15-2
medoid: GCA 018896595 1
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AAI clade 15-3
medoid: GCA 001787205 1
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AAI clade 15-4
medoid: GCA 016206085 1
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AAI clade 15-5
medoid: GCA 001001115 1
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AAI clade 15-6
medoid: GCA 903837175 1
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AAI clade 15-7
medoid: GCA 016178535 1
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AAI clade 15-8
medoid: GCA 003170325 1
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AAI clade 15-9
medoid: GCA 016217925 1
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AAI clade 15-9-1
medoid: GCA 017134395 1
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AAI clade 15-9-2
medoid: GCA 016217925 1
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AAI clade 15-9-3
medoid: GCA 903819895 1
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AAI clade 15-9-3-1
medoid: GCA 001773575 1
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AAI clade 15-9-3-2
medoid: GCA 009691465 1
3 datasets: GCA 001775445 1 (AAI: 58.76%), GCA 009691465 1 (AAI: 100.0%), and GCA 903915735 1 (AAI: 54.92%)
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AAI clade 15-9-3-3
medoid: GCA 001775475 1
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AAI clade 15-9-3-4
medoid: GCA 001775485 1
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AAI clade 15-9-3-5
medoid: GCA 001781435 1
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AAI clade 15-9-3-6
medoid: GCA 003135635 1
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AAI clade 15-9-3-7
medoid: GCA 014379165 1
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AAI clade 15-9-3-8
medoid: GCA 016176685 1
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AAI clade 15-9-3-9
medoid: GCA 903819895 1
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AAI clade 15-9-3-10
medoid: GCA 903824155 1
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AAI clade 15-9-3-11
medoid: GCA 903840375 1
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AAI clade 15-9-3-12
medoid: GCA 903900775 1
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AAI clade 15-9-3-1
medoid: GCA 001773575 1
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AAI clade 15-9-4
medoid: GCA 001779595 1
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AAI clade 15-9-1
medoid: GCA 017134395 1
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AAI clade 15-10
medoid: GCA 018968865 1
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AAI clade 15-1
medoid: GCA 001872265 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1