AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
    • AAI clade 15-1 medoid: GCA 001872265 1
    • AAI clade 15-2 medoid: GCA 018896595 1
    • AAI clade 15-3 medoid: GCA 001787205 1
    • AAI clade 15-4 medoid: GCA 016206085 1
    • AAI clade 15-5 medoid: GCA 001001115 1
    • AAI clade 15-6 medoid: GCA 903837175 1
    • AAI clade 15-7 medoid: GCA 016178535 1
    • AAI clade 15-8 medoid: GCA 003170325 1
      • AAI clade 15-8-1 medoid: GCA 001824295 1
      • AAI clade 15-8-2 medoid: GCA 018971765 1
      • AAI clade 15-8-3 medoid: GCA 000999175 1
      • AAI clade 15-8-4 medoid: GCA 001821395 1
      • AAI clade 15-8-5 medoid: GCA 001004005 1
      • AAI clade 15-8-6 medoid: GCA 001004085 1
      • AAI clade 15-8-7 medoid: GCA 018401295 1
      • AAI clade 15-8-8 medoid: GCA 903839725 1
      • AAI clade 15-8-9 medoid: GCA 002778715 1
      • AAI clade 15-8-10 medoid: GCA 009695005 1
      • AAI clade 15-8-11 medoid: GCA 001821135 1
      • AAI clade 15-8-12 medoid: GCA 003170325 1
      • AAI clade 15-8-13 medoid: GCA 003483855 1
      • AAI clade 15-8-14 medoid: GCA 001825335 1
      • AAI clade 15-8-15 medoid: GCA 018062385 1
      • AAI clade 15-8-16 medoid: GCA 016784285 1
      • AAI clade 15-8-17 medoid: GCA 016215405 1
      • AAI clade 15-8-18 medoid: GCA 002774795 1
      • AAI clade 15-8-19 medoid: GCA 903823865 1
      • AAI clade 15-8-20 medoid: GCA 903839695 1
        7 datasets: GCA 003151615 1 (AAI: 51.77%), GCA 004298345 1 (AAI: 48.48%), GCA 016215455 1 (AAI: 50.49%), GCA 018060945 1 (AAI: 48.25%), GCA 903839695 1 (AAI: 100.0%), GCA 903857825 1 (AAI: 66.47%), and GCA 903893855 1 (AAI: 50.58%)
      • AAI clade 15-8-21 medoid: GCA 013152035 1
      • AAI clade 15-8-22 medoid: GCA 003455555 1
      • AAI clade 15-8-23 medoid: GCA 007129455 1
      • AAI clade 15-8-24 medoid: GCA 014378965 1
      • AAI clade 15-8-25 medoid: GCA 016201425 1
      • AAI clade 15-8-26 medoid: GCA 903936565 1
      • AAI clade 15-8-27 medoid: GCA 903822075 1
      • AAI clade 15-8-28 medoid: GCA 903870315 1
    • AAI clade 15-9 medoid: GCA 016217925 1
    • AAI clade 15-10 medoid: GCA 018968865 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1