AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
    • AAI clade 15-1 medoid: GCA 001872265 1
    • AAI clade 15-2 medoid: GCA 018896595 1
    • AAI clade 15-3 medoid: GCA 001787205 1
    • AAI clade 15-4 medoid: GCA 016206085 1
    • AAI clade 15-5 medoid: GCA 001001115 1
    • AAI clade 15-6 medoid: GCA 903837175 1
    • AAI clade 15-7 medoid: GCA 016178535 1
    • AAI clade 15-8 medoid: GCA 003170325 1
    • AAI clade 15-9 medoid: GCA 016217925 1
    • AAI clade 15-10 medoid: GCA 018968865 1
      • AAI clade 15-10-1 medoid: GCA 018968865 1
        • AAI clade 15-10-1-1 medoid: GCA 001004665 1
        • AAI clade 15-10-1-2 medoid: GCA 018968865 1
          • AAI clade 15-10-1-2-1 medoid: GCA 018968865 1
            • AAI clade 15-10-1-2-1-1 medoid: GCA 018968865 1
              • AAI clade 15-10-1-2-1-1-1 medoid: GCA 018968865 1
                • AAI clade 15-10-1-2-1-1-1-1 medoid: GCA 018968865 1
                  • AAI clade 15-10-1-2-1-1-1-1-1 medoid: GCA 001004905 1
                  • AAI clade 15-10-1-2-1-1-1-1-2 medoid: GCA 001781715 1
                  • AAI clade 15-10-1-2-1-1-1-1-3 medoid: GCA 001781915 1
                  • AAI clade 15-10-1-2-1-1-1-1-4 medoid: GCA 016182285 1
                    2 datasets: GCA 001783465 1 (AAI: 59.57%) and GCA 016182285 1 (AAI: 100.0%)
                  • AAI clade 15-10-1-2-1-1-1-1-5 medoid: GCA 002429325 1
                  • AAI clade 15-10-1-2-1-1-1-1-6 medoid: GCA 002793115 1
                  • AAI clade 15-10-1-2-1-1-1-1-7 medoid: GCA 016182485 1
                  • AAI clade 15-10-1-2-1-1-1-1-8 medoid: GCA 016217905 1
                  • AAI clade 15-10-1-2-1-1-1-1-9 medoid: GCA 018971045 1
                  • AAI clade 15-10-1-2-1-1-1-1-10 medoid: GCA 018971265 1
                • AAI clade 15-10-1-2-1-1-1-2 medoid: GCA 903825105 1
              • AAI clade 15-10-1-2-1-1-2 medoid: GCA 003230945 1
            • AAI clade 15-10-1-2-1-2 medoid: GCA 018970465 1
          • AAI clade 15-10-1-2-2 medoid: GCA 002773355 1
          • AAI clade 15-10-1-2-3 medoid: GCA 001781625 1
          • AAI clade 15-10-1-2-4 medoid: GCA 002255585 1
          • AAI clade 15-10-1-2-5 medoid: GCA 018969385 1
      • AAI clade 15-10-2 medoid: GCA 002441425 1
      • AAI clade 15-10-3 medoid: GCA 001189215 1
      • AAI clade 15-10-4 medoid: GCA 001781415 1
      • AAI clade 15-10-5 medoid: GCA 002331145 1
      • AAI clade 15-10-6 medoid: GCA 004322365 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1