AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 14-1
medoid: GCA 015060735 1
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AAI clade 14-1-1
medoid: GCA 900552075 1
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AAI clade 14-1-2
medoid: GCA 017480525 1
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AAI clade 14-1-3
medoid: GCA 015060735 1
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AAI clade 14-1-3-1
medoid: GCA 013204355 1
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AAI clade 14-1-3-2
medoid: GCA 016234065 1
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AAI clade 14-1-3-3
medoid: GCA 016205905 1
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AAI clade 14-1-3-4
medoid: GCA 018304145 1
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AAI clade 14-1-3-5
medoid: GCA 902514275 1
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AAI clade 14-1-3-6
medoid: GCA 002398565 1
4 datasets: GCA 002069095 1 (AAI: 56.92%), GCA 002398565 1 (AAI: 100.0%), GCA 002411515 1 (AAI: 68.35%), and GCA 900556485 1 (AAI: 53.75%)
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AAI clade 14-1-3-7
medoid: GCA 905197435 1
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AAI clade 14-1-3-8
medoid: GCA 905235565 1
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AAI clade 14-1-3-9
medoid: GCA 905234645 1
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AAI clade 14-1-3-10
medoid: GCA 015060705 1
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AAI clade 14-1-3-11
medoid: GCA 017444365 1
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AAI clade 14-1-3-12
medoid: GCA 900552465 1
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AAI clade 14-1-3-13
medoid: GCA 016788685 1
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AAI clade 14-1-3-14
medoid: GCA 017965125 1
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AAI clade 14-1-3-15
medoid: GCA 014801945 1
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AAI clade 14-1-3-16
medoid: GCA 017630035 1
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AAI clade 14-1-3-17
medoid: GCA 017517925 1
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AAI clade 14-1-3-18
medoid: GCA 017416805 1
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AAI clade 14-1-3-19
medoid: GCA 017651505 1
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AAI clade 14-1-3-20
medoid: GCA 017468435 1
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AAI clade 14-1-3-21
medoid: GCA 017860345 1
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AAI clade 14-1-3-1
medoid: GCA 013204355 1
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AAI clade 14-1-1
medoid: GCA 900552075 1
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AAI clade 14-2
medoid: GCA 017424405 1
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AAI clade 14-3
medoid: GCA 017555585 1
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AAI clade 14-1
medoid: GCA 015060735 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1