AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
    • AAI clade 13-1 medoid: GCA 014845975 1
    • AAI clade 13-2 medoid: GCA 900758895 1
    • AAI clade 13-3 medoid: GCA 900547225 1
    • AAI clade 13-4 medoid: GCA 017433415 1
    • AAI clade 13-5 medoid: GCA 900549325 1
    • AAI clade 13-6 medoid: GCA 900768345 1
      • AAI clade 13-6-1 medoid: GCA 000434555 1
      • AAI clade 13-6-2 medoid: GCA 016302505 1
      • AAI clade 13-6-3 medoid: GCA 000438415 1
      • AAI clade 13-6-4 medoid: GCA 900768345 1
        5 datasets: GCA 004552445 1 (AAI: 84.56%), GCA 004560915 1 (AAI: 70.93%), GCA 900768345 1 (AAI: 100.0%), GCA 900772435 1 (AAI: 88.56%), and GCA 905193755 1 (AAI: 83.06%)
      • AAI clade 13-6-5 medoid: GCA 012512795 1
      • AAI clade 13-6-6 medoid: GCA 016292035 1
      • AAI clade 13-6-7 medoid: GCA 017397685 1
      • AAI clade 13-6-8 medoid: GCA 017397745 1
      • AAI clade 13-6-9 medoid: GCA 017428485 1
      • AAI clade 13-6-10 medoid: GCA 017473105 1
      • AAI clade 13-6-11 medoid: GCA 017544525 1
      • AAI clade 13-6-12 medoid: GCA 902778125 1
      • AAI clade 13-6-13 medoid: GCA 900321795 1
      • AAI clade 13-6-14 medoid: GCA 900553435 1
      • AAI clade 13-6-15 medoid: GCA 900553835 1
      • AAI clade 13-6-16 medoid: GCA 900556025 1
      • AAI clade 13-6-17 medoid: GCA 902761685 1
      • AAI clade 13-6-18 medoid: GCA 902764145 1
      • AAI clade 13-6-19 medoid: GCA 905235065 1
      • AAI clade 13-6-20 medoid: GCA 910586295 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1