AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
    • AAI clade 13-1 medoid: GCA 014845975 1
    • AAI clade 13-2 medoid: GCA 900758895 1
    • AAI clade 13-3 medoid: GCA 900547225 1
    • AAI clade 13-4 medoid: GCA 017433415 1
    • AAI clade 13-5 medoid: GCA 900549325 1
      • AAI clade 13-5-1 medoid: GCA 900549325 1
        3 datasets: GCA 000431795 1 (AAI: 92.32%), GCA 002375205 1 (AAI: 63.13%), and GCA 900549325 1 (AAI: 100.0%)
      • AAI clade 13-5-2 medoid: GCA 000432575 1
      • AAI clade 13-5-3 medoid: GCA 000437895 1
      • AAI clade 13-5-4 medoid: GCA 900548425 1
      • AAI clade 13-5-5 medoid: GCA 002438545 1
      • AAI clade 13-5-6 medoid: GCA 003543215 1
      • AAI clade 13-5-7 medoid: GCA 016291995 1
      • AAI clade 13-5-8 medoid: GCA 016302935 1
      • AAI clade 13-5-9 medoid: GCA 017409025 1
      • AAI clade 13-5-10 medoid: GCA 017432825 1
      • AAI clade 13-5-11 medoid: GCA 017480975 1
      • AAI clade 13-5-12 medoid: GCA 017887885 1
      • AAI clade 13-5-13 medoid: GCA 902788975 1
      • AAI clade 13-5-14 medoid: GCA 900557675 1
      • AAI clade 13-5-15 medoid: GCA 905188025 1
      • AAI clade 13-5-16 medoid: GCA 900772445 1
      • AAI clade 13-5-17 medoid: GCA 902766815 1
      • AAI clade 13-5-18 medoid: GCA 902766875 1
    • AAI clade 13-6 medoid: GCA 900768345 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1