AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
    • AAI clade 13-1 medoid: GCA 014845975 1
    • AAI clade 13-2 medoid: GCA 900758895 1
      • AAI clade 13-2-1 medoid: GCA 012798335 1
      • AAI clade 13-2-2 medoid: GCA 018825865 1
      • AAI clade 13-2-3 medoid: GCA 000433475 1
      • AAI clade 13-2-4 medoid: GCA 000435515 1
      • AAI clade 13-2-5 medoid: GCA 000437315 1
      • AAI clade 13-2-6 medoid: GCA 000437355 1
      • AAI clade 13-2-7 medoid: GCA 000438195 1
      • AAI clade 13-2-8 medoid: GCA 910577505 1
      • AAI clade 13-2-9 medoid: GCA 900553855 1
      • AAI clade 13-2-10 medoid: GCA 017450205 1
      • AAI clade 13-2-11 medoid: GCA 012510695 1
      • AAI clade 13-2-12 medoid: GCA 012520055 1
      • AAI clade 13-2-13 medoid: GCA 017434825 1
      • AAI clade 13-2-14 medoid: GCA 017441065 1
      • AAI clade 13-2-15 medoid: GCA 016297695 1
      • AAI clade 13-2-16 medoid: GCA 017484125 1
      • AAI clade 13-2-17 medoid: GCA 900546715 1
      • AAI clade 13-2-18 medoid: GCA 016302065 1
      • AAI clade 13-2-19 medoid: GCA 017435485 1
      • AAI clade 13-2-20 medoid: GCA 017411405 1
      • AAI clade 13-2-21 medoid: GCA 017462645 1
      • AAI clade 13-2-22 medoid: GCA 018712835 1
      • AAI clade 13-2-23 medoid: GCA 017542465 1
      • AAI clade 13-2-24 medoid: GCA 017548925 1
      • AAI clade 13-2-25 medoid: GCA 910587065 1
      • AAI clade 13-2-26 medoid: GCA 900547775 1
      • AAI clade 13-2-27 medoid: GCA 902783555 1
      • AAI clade 13-2-28 medoid: GCA 902773085 1
      • AAI clade 13-2-29 medoid: GCA 910583745 1
      • AAI clade 13-2-30 medoid: GCA 902797415 1
      • AAI clade 13-2-31 medoid: GCA 910583945 1
        3 datasets: GCA 910579535 1 (AAI: 80.37%), GCA 910583945 1 (AAI: 100.0%), and GCA 910587325 1 (AAI: 62.25%)
      • AAI clade 13-2-32 medoid: GCA 910587775 1
    • AAI clade 13-3 medoid: GCA 900547225 1
    • AAI clade 13-4 medoid: GCA 017433415 1
    • AAI clade 13-5 medoid: GCA 900549325 1
    • AAI clade 13-6 medoid: GCA 900768345 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1