AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
    • AAI clade 13-1 medoid: GCA 014845975 1
      • AAI clade 13-1-1 medoid: GCA 017461465 1
      • AAI clade 13-1-2 medoid: GCA 900321995 1
      • AAI clade 13-1-3 medoid: GCA 017887425 1
      • AAI clade 13-1-4 medoid: GCA 902783265 1
      • AAI clade 13-1-5 medoid: GCA 000433875 1
      • AAI clade 13-1-6 medoid: GCA 017428495 1
      • AAI clade 13-1-7 medoid: GCA 002299475 1
      • AAI clade 13-1-8 medoid: GCA 002373085 1
      • AAI clade 13-1-9 medoid: GCA 002374055 1
      • AAI clade 13-1-10 medoid: GCA 002404865 1
      • AAI clade 13-1-11 medoid: GCA 002410935 1
      • AAI clade 13-1-12 medoid: GCA 012841205 1
      • AAI clade 13-1-13 medoid: GCA 910576795 1
      • AAI clade 13-1-14 medoid: GCA 910584165 1
      • AAI clade 13-1-15 medoid: GCA 003501485 1
      • AAI clade 13-1-16 medoid: GCA 003559495 1
      • AAI clade 13-1-17 medoid: GCA 003560455 1
      • AAI clade 13-1-18 medoid: GCA 007116005 1
      • AAI clade 13-1-19 medoid: GCA 007117695 1
      • AAI clade 13-1-20 medoid: GCA 007117285 1
      • AAI clade 13-1-21 medoid: GCA 007117415 1
      • AAI clade 13-1-22 medoid: GCA 007117555 1
      • AAI clade 13-1-23 medoid: GCA 012520435 1
      • AAI clade 13-1-24 medoid: GCA 012521575 1
      • AAI clade 13-1-25 medoid: GCA 012727915 1
      • AAI clade 13-1-26 medoid: GCA 014845975 1
      • AAI clade 13-1-27 medoid: GCA 017536505 1
      • AAI clade 13-1-28 medoid: GCA 015059365 1
        3 datasets: GCA 015059195 1 (AAI: 72.17%), GCA 015059365 1 (AAI: 100.0%), and GCA 900544605 1 (AAI: 63.79%)
      • AAI clade 13-1-29 medoid: GCA 017435465 1
      • AAI clade 13-1-30 medoid: GCA 015059545 1
      • AAI clade 13-1-31 medoid: GCA 016290195 1
      • AAI clade 13-1-32 medoid: GCA 016290885 1
      • AAI clade 13-1-33 medoid: GCA 900546055 1
      • AAI clade 13-1-34 medoid: GCA 017476705 1
      • AAI clade 13-1-35 medoid: GCA 017479485 1
      • AAI clade 13-1-36 medoid: GCA 017484205 1
      • AAI clade 13-1-37 medoid: GCA 017515795 1
      • AAI clade 13-1-38 medoid: GCA 017651565 1
      • AAI clade 13-1-39 medoid: GCA 018713045 1
      • AAI clade 13-1-40 medoid: GCA 905203475 1
      • AAI clade 13-1-41 medoid: GCA 900552235 1
      • AAI clade 13-1-42 medoid: GCA 902767245 1
      • AAI clade 13-1-43 medoid: GCA 902779035 1
      • AAI clade 13-1-44 medoid: GCA 902783215 1
      • AAI clade 13-1-45 medoid: GCA 902836505 1
      • AAI clade 13-1-46 medoid: GCA 905236395 1
    • AAI clade 13-2 medoid: GCA 900758895 1
    • AAI clade 13-3 medoid: GCA 900547225 1
    • AAI clade 13-4 medoid: GCA 017433415 1
    • AAI clade 13-5 medoid: GCA 900549325 1
    • AAI clade 13-6 medoid: GCA 900768345 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1