AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 12-1
medoid: GCA 017406465 1
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AAI clade 12-2
medoid: GCA 002304435 1
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AAI clade 12-3
medoid: GCA 011525685 1
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AAI clade 12-4
medoid: GCA 002686085 1
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AAI clade 12-5
medoid: GCA 904424815 1
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AAI clade 12-6
medoid: GCA 002342345 1
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AAI clade 12-7
medoid: GCA 903827375 1
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AAI clade 12-8
medoid: GCA 903848465 1
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AAI clade 12-9
medoid: GCA 018239665 1
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AAI clade 12-9-1
medoid: GCA 001897225 1
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AAI clade 12-9-2
medoid: GCA 001464115 1
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AAI clade 12-9-3
medoid: GCA 001796315 1
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AAI clade 12-9-4
medoid: GCA 002709385 1
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AAI clade 12-9-5
medoid: GCF 901000775 1
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AAI clade 12-9-6
medoid: GCA 903839985 1
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AAI clade 12-9-7
medoid: GCA 013288075 1
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AAI clade 12-9-8
medoid: GCA 009937555 1
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AAI clade 12-9-9
medoid: GCA 016866495 1
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AAI clade 12-9-10
medoid: GCA 013285585 1
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AAI clade 12-9-11
medoid: GCA 018240065 1
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AAI clade 12-9-12
medoid: GCA 013287365 1
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AAI clade 12-9-13
medoid: GCA 018239665 1
6 datasets: GCA 013287985 1 (AAI: 51.31%), GCA 013288005 1 (AAI: 50.93%), GCA 016866585 1 (AAI: 51.57%), GCA 018239665 1 (AAI: 100.0%), GCA 018240225 1 (AAI: 76.23%), and GCA 018333475 1 (AAI: 52.24%)
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AAI clade 12-9-14
medoid: GCA 013288845 1
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AAI clade 12-9-15
medoid: GCA 014239035 1
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AAI clade 12-9-16
medoid: GCA 016191565 1
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AAI clade 12-9-17
medoid: GCA 016213235 1
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AAI clade 12-9-18
medoid: GCA 016219355 1
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AAI clade 12-9-19
medoid: GCA 016931275 1
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AAI clade 12-9-20
medoid: GCF 000750955 1
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AAI clade 12-9-1
medoid: GCA 001897225 1
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AAI clade 12-10
medoid: GCA 903839035 1
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AAI clade 12-11
medoid: GCA 002304425 1
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AAI clade 12-12
medoid: GCA 017554445 1
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AAI clade 12-13
medoid: GCA 905182435 1
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AAI clade 12-14
medoid: GCA 900549415 1
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AAI clade 12-15
medoid: GCA 002347655 1
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AAI clade 12-16
medoid: GCA 002338345 1
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AAI clade 12-17
medoid: GCA 017558005 1
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AAI clade 12-18
medoid: GCA 002713685 1
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AAI clade 12-19
medoid: GCA 016795385 1
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AAI clade 12-20
medoid: GCA 903831635 1
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AAI clade 12-21
medoid: GCA 004293385 1
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AAI clade 12-22
medoid: GCA 003220075 1
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AAI clade 12-23
medoid: GCA 015658765 1
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AAI clade 12-24
medoid: GCA 902802945 1
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AAI clade 12-25
medoid: GCA 015061685 1
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AAI clade 12-26
medoid: GCA 900320095 1
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AAI clade 12-27
medoid: GCA 017435365 1
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AAI clade 12-28
medoid: GCA 903939515 1
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AAI clade 12-29
medoid: GCA 017413145 1
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AAI clade 12-30
medoid: GCF 000020225 1
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AAI clade 12-31
medoid: GCA 014239335 1
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AAI clade 12-32
medoid: GCA 903921455 1
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AAI clade 12-33
medoid: GCA 003218415 1
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AAI clade 12-34
medoid: GCA 017531845 1
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AAI clade 12-1
medoid: GCA 017406465 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1