AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 12-1
medoid: GCA 017406465 1
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AAI clade 12-2
medoid: GCA 002304435 1
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AAI clade 12-3
medoid: GCA 011525685 1
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AAI clade 12-4
medoid: GCA 002686085 1
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AAI clade 12-5
medoid: GCA 904424815 1
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AAI clade 12-6
medoid: GCA 002342345 1
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AAI clade 12-7
medoid: GCA 903827375 1
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AAI clade 12-8
medoid: GCA 903848465 1
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AAI clade 12-9
medoid: GCA 018239665 1
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AAI clade 12-10
medoid: GCA 903839035 1
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AAI clade 12-11
medoid: GCA 002304425 1
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AAI clade 12-12
medoid: GCA 017554445 1
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AAI clade 12-13
medoid: GCA 905182435 1
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AAI clade 12-14
medoid: GCA 900549415 1
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AAI clade 12-15
medoid: GCA 002347655 1
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AAI clade 12-16
medoid: GCA 002338345 1
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AAI clade 12-17
medoid: GCA 017558005 1
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AAI clade 12-18
medoid: GCA 002713685 1
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AAI clade 12-19
medoid: GCA 016795385 1
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AAI clade 12-19-1
medoid: GCA 002396885 1
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AAI clade 12-19-2
medoid: GCA 013213905 1
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AAI clade 12-19-3
medoid: GCA 002422425 1
5 datasets: GCA 002344215 1 (AAI: 67.22%), GCA 002422425 1 (AAI: 100.0%), GCA 012719225 1 (AAI: 69.22%), GCA 017991025 1 (AAI: 67.6%), and GCA 018058245 1 (AAI: 66.96%)
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AAI clade 12-19-4
medoid: GCA 002698785 1
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AAI clade 12-19-5
medoid: GCA 007123195 1
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AAI clade 12-19-6
medoid: GCA 007123695 1
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AAI clade 12-19-7
medoid: GCA 009936795 1
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AAI clade 12-19-8
medoid: GCA 013003335 1
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AAI clade 12-19-9
medoid: GCA 013152075 1
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AAI clade 12-19-10
medoid: GCA 016795505 1
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AAI clade 12-19-11
medoid: GCA 018970725 1
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AAI clade 12-19-1
medoid: GCA 002396885 1
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AAI clade 12-20
medoid: GCA 903831635 1
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AAI clade 12-21
medoid: GCA 004293385 1
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AAI clade 12-22
medoid: GCA 003220075 1
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AAI clade 12-23
medoid: GCA 015658765 1
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AAI clade 12-24
medoid: GCA 902802945 1
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AAI clade 12-25
medoid: GCA 015061685 1
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AAI clade 12-26
medoid: GCA 900320095 1
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AAI clade 12-27
medoid: GCA 017435365 1
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AAI clade 12-28
medoid: GCA 903939515 1
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AAI clade 12-29
medoid: GCA 017413145 1
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AAI clade 12-30
medoid: GCF 000020225 1
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AAI clade 12-31
medoid: GCA 014239335 1
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AAI clade 12-32
medoid: GCA 903921455 1
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AAI clade 12-33
medoid: GCA 003218415 1
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AAI clade 12-34
medoid: GCA 017531845 1
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AAI clade 12-1
medoid: GCA 017406465 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1