AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 11-1
medoid: GCA 017447265 1
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AAI clade 11-2
medoid: GCA 014801985 1
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AAI clade 11-3
medoid: GCA 902362375 1
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AAI clade 11-4
medoid: GCF 002224675 1
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AAI clade 11-5
medoid: GCF 000519105 1
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AAI clade 11-6
medoid: GCF 000154105 1
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AAI clade 11-7
medoid: GCA 018054805 1
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AAI clade 11-8
medoid: GCA 900544195 1
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AAI clade 11-9
medoid: GCA 014801735 1
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AAI clade 11-9-1
medoid: GCA 900546365 1
4 datasets: GCA 000431155 1 (AAI: 79.75%), GCA 900546365 1 (AAI: 100.0%), GCA 900760855 1 (AAI: 72.47%), and GCA 910586895 1 (AAI: 66.1%)
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AAI clade 11-9-2
medoid: GCA 014801735 1
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AAI clade 11-9-3
medoid: GCA 000434215 1
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AAI clade 11-9-4
medoid: GCA 900544305 1
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AAI clade 11-9-5
medoid: GCA 001689405 1
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AAI clade 11-9-6
medoid: GCA 009775195 1
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AAI clade 11-9-7
medoid: GCA 017436845 1
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AAI clade 11-9-8
medoid: GCA 013316535 1
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AAI clade 11-9-9
medoid: GCA 910584825 1
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AAI clade 11-9-10
medoid: GCA 900539915 1
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AAI clade 11-9-11
medoid: GCA 001689535 1
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AAI clade 11-9-12
medoid: GCA 910575615 1
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AAI clade 11-9-13
medoid: GCA 900540625 1
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AAI clade 11-9-14
medoid: GCA 003731685 1
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AAI clade 11-9-15
medoid: GCA 905210435 1
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AAI clade 11-9-16
medoid: GCA 002426885 1
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AAI clade 11-9-17
medoid: GCA 910578035 1
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AAI clade 11-9-18
medoid: GCA 002490725 1
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AAI clade 11-9-19
medoid: GCA 900762315 1
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AAI clade 11-9-20
medoid: GCA 002730315 1
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AAI clade 11-9-21
medoid: GCA 003155495 1
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AAI clade 11-9-22
medoid: GCA 003150235 1
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AAI clade 11-9-23
medoid: GCA 003519375 1
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AAI clade 11-9-24
medoid: GCA 910587355 1
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AAI clade 11-9-25
medoid: GCA 900759895 1
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AAI clade 11-9-26
medoid: GCA 910577355 1
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AAI clade 11-9-27
medoid: GCA 900769345 1
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AAI clade 11-9-28
medoid: GCA 014801525 1
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AAI clade 11-9-29
medoid: GCA 014654705 1
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AAI clade 11-9-30
medoid: GCA 910578095 1
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AAI clade 11-9-31
medoid: GCA 011522855 1
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AAI clade 11-9-32
medoid: GCA 018224415 1
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AAI clade 11-9-33
medoid: GCA 910579185 1
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AAI clade 11-9-34
medoid: GCA 910578445 1
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AAI clade 11-9-35
medoid: GCA 017409345 1
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AAI clade 11-9-36
medoid: GCA 017521245 1
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AAI clade 11-9-37
medoid: GCA 015061055 1
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AAI clade 11-9-38
medoid: GCA 015490805 1
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AAI clade 11-9-39
medoid: GCA 017548545 1
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AAI clade 11-9-40
medoid: GCA 910578365 1
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AAI clade 11-9-41
medoid: GCA 017522135 1
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AAI clade 11-9-42
medoid: GCA 910587475 1
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AAI clade 11-9-43
medoid: GCA 018266755 1
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AAI clade 11-9-44
medoid: GCA 018432645 1
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AAI clade 11-9-45
medoid: GCA 018644935 1
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AAI clade 11-9-46
medoid: GCF 000512915 1
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AAI clade 11-9-47
medoid: GCA 019248075 1
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AAI clade 11-9-48
medoid: GCA 900539765 1
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AAI clade 11-9-49
medoid: GCA 900541275 1
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AAI clade 11-9-50
medoid: GCA 910585755 1
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AAI clade 11-9-51
medoid: GCF 017908595 1
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AAI clade 11-9-1
medoid: GCA 900546365 1
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AAI clade 11-10
medoid: GCA 017449675 1
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AAI clade 11-11
medoid: GCA 017477245 1
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AAI clade 11-12
medoid: GCA 900541585 1
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AAI clade 11-13
medoid: GCA 016715075 1
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AAI clade 11-14
medoid: GCA 002372855 1
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AAI clade 11-15
medoid: GCA 900317055 1
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AAI clade 11-16
medoid: GCA 902791865 1
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AAI clade 11-17
medoid: GCA 902774295 1
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AAI clade 11-18
medoid: GCA 903945175 1
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AAI clade 11-19
medoid: GCF 003712195 1
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AAI clade 11-20
medoid: GCA 902801475 1
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AAI clade 11-21
medoid: GCA 017438945 1
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AAI clade 11-22
medoid: GCA 017961145 1
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AAI clade 11-23
medoid: GCA 015060255 1
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AAI clade 11-24
medoid: GCA 017394705 1
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AAI clade 11-25
medoid: GCA 017405965 1
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AAI clade 11-26
medoid: GCF 000025925 1
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AAI clade 11-27
medoid: GCA 016286385 1
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AAI clade 11-28
medoid: GCA 017465575 1
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AAI clade 11-1
medoid: GCA 017447265 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1