AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 11-1
medoid: GCA 017447265 1
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AAI clade 11-2
medoid: GCA 014801985 1
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AAI clade 11-3
medoid: GCA 902362375 1
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AAI clade 11-4
medoid: GCF 002224675 1
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AAI clade 11-5
medoid: GCF 000519105 1
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AAI clade 11-6
medoid: GCF 000154105 1
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AAI clade 11-7
medoid: GCA 018054805 1
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AAI clade 11-8
medoid: GCA 900544195 1
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AAI clade 11-9
medoid: GCA 014801735 1
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AAI clade 11-10
medoid: GCA 017449675 1
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AAI clade 11-11
medoid: GCA 017477245 1
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AAI clade 11-12
medoid: GCA 900541585 1
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AAI clade 11-13
medoid: GCA 016715075 1
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AAI clade 11-14
medoid: GCA 002372855 1
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AAI clade 11-15
medoid: GCA 900317055 1
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AAI clade 11-16
medoid: GCA 902791865 1
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AAI clade 11-17
medoid: GCA 902774295 1
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AAI clade 11-18
medoid: GCA 903945175 1
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AAI clade 11-19
medoid: GCF 003712195 1
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AAI clade 11-20
medoid: GCA 902801475 1
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AAI clade 11-21
medoid: GCA 017438945 1
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AAI clade 11-22
medoid: GCA 017961145 1
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AAI clade 11-23
medoid: GCA 015060255 1
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AAI clade 11-24
medoid: GCA 017394705 1
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AAI clade 11-25
medoid: GCA 017405965 1
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AAI clade 11-26
medoid: GCF 000025925 1
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AAI clade 11-27
medoid: GCA 016286385 1
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AAI clade 11-28
medoid: GCA 017465575 1
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AAI clade 11-28-1
medoid: GCA 017937805 1
8 datasets: GCA 015059685 1 (AAI: 76.71%), GCA 015059865 1 (AAI: 83.14%), GCA 015059875 1 (AAI: 81.06%), GCA 017502025 1 (AAI: 76.35%), GCA 017520545 1 (AAI: 79.85%), GCA 017560455 1 (AAI: 75.88%), GCA 017632115 1 (AAI: 73.01%), and GCA 017937805 1 (AAI: 100.0%)
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AAI clade 11-28-2
medoid: GCA 015059715 1
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AAI clade 11-28-3
medoid: GCA 015059845 1
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AAI clade 11-28-4
medoid: GCA 015059905 1
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AAI clade 11-28-5
medoid: GCA 015059955 1
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AAI clade 11-28-6
medoid: GCA 015060015 1
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AAI clade 11-28-7
medoid: GCA 017465575 1
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AAI clade 11-28-8
medoid: GCA 015060165 1
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AAI clade 11-28-9
medoid: GCA 017408825 1
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AAI clade 11-28-10
medoid: GCA 017630455 1
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AAI clade 11-28-11
medoid: GCA 017398555 1
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AAI clade 11-28-12
medoid: GCA 017390585 1
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AAI clade 11-28-13
medoid: GCA 017531305 1
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AAI clade 11-28-14
medoid: GCA 017399485 1
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AAI clade 11-28-15
medoid: GCA 017403125 1
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AAI clade 11-28-16
medoid: GCA 017517705 1
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AAI clade 11-28-17
medoid: GCA 017936005 1
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AAI clade 11-28-18
medoid: GCA 900766655 1
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AAI clade 11-28-19
medoid: GCA 017521945 1
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AAI clade 11-28-20
medoid: GCA 017536605 1
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AAI clade 11-28-21
medoid: GCA 017546345 1
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AAI clade 11-28-22
medoid: GCA 017555545 1
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AAI clade 11-28-23
medoid: GCA 904502285 1
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AAI clade 11-28-24
medoid: GCA 900768045 1
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AAI clade 11-28-25
medoid: GCA 017646625 1
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AAI clade 11-28-26
medoid: GCA 017647625 1
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AAI clade 11-28-27
medoid: GCA 017934845 1
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AAI clade 11-28-28
medoid: GCA 017936685 1
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AAI clade 11-28-29
medoid: GCA 900769525 1
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AAI clade 11-28-1
medoid: GCA 017937805 1
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AAI clade 11-1
medoid: GCA 017447265 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1