AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 11-1
medoid: GCA 017447265 1
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AAI clade 11-2
medoid: GCA 014801985 1
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AAI clade 11-3
medoid: GCA 902362375 1
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AAI clade 11-4
medoid: GCF 002224675 1
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AAI clade 11-5
medoid: GCF 000519105 1
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AAI clade 11-6
medoid: GCF 000154105 1
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AAI clade 11-7
medoid: GCA 018054805 1
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AAI clade 11-8
medoid: GCA 900544195 1
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AAI clade 11-9
medoid: GCA 014801735 1
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AAI clade 11-10
medoid: GCA 017449675 1
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AAI clade 11-11
medoid: GCA 017477245 1
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AAI clade 11-12
medoid: GCA 900541585 1
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AAI clade 11-12-1
medoid: GCF 002161445 1
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AAI clade 11-12-2
medoid: GCA 910577125 1
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AAI clade 11-12-3
medoid: GCF 900083545 1
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AAI clade 11-12-4
medoid: GCA 002293535 1
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AAI clade 11-12-5
medoid: GCA 910583985 1
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AAI clade 11-12-5-1
medoid: GCA 009783565 1
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AAI clade 11-12-5-2
medoid: GCA 014982715 1
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AAI clade 11-12-5-3
medoid: GCA 015222165 1
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AAI clade 11-12-5-4
medoid: GCA 017415005 1
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AAI clade 11-12-5-5
medoid: GCA 018710935 1
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AAI clade 11-12-5-6
medoid: GCA 019119305 1
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AAI clade 11-12-5-7
medoid: GCA 910583985 1
3 datasets: GCA 900549685 1 (AAI: 80.74%), GCA 910583985 1 (AAI: 100.0%), and GCF 000321205 1 (AAI: 70.64%)
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AAI clade 11-12-5-8
medoid: GCA 904501625 1
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AAI clade 11-12-5-9
medoid: GCA 910588925 1
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AAI clade 11-12-5-10
medoid: GCF 000798815 1
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AAI clade 11-12-5-11
medoid: GCF 009557455 1
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AAI clade 11-12-5-1
medoid: GCA 009783565 1
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AAI clade 11-12-6
medoid: GCA 900761235 1
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AAI clade 11-12-7
medoid: GCA 017936605 1
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AAI clade 11-12-8
medoid: GCA 015060065 1
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AAI clade 11-12-9
medoid: GCA 017398045 1
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AAI clade 11-12-10
medoid: GCA 015060075 1
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AAI clade 11-12-11
medoid: GCA 017936385 1
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AAI clade 11-12-12
medoid: GCA 017631375 1
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AAI clade 11-12-13
medoid: GCA 017442365 1
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AAI clade 11-12-14
medoid: GCA 900104605 1
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AAI clade 11-12-15
medoid: GCA 900539755 1
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AAI clade 11-12-16
medoid: GCF 006542665 1
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AAI clade 11-12-1
medoid: GCF 002161445 1
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AAI clade 11-13
medoid: GCA 016715075 1
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AAI clade 11-14
medoid: GCA 002372855 1
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AAI clade 11-15
medoid: GCA 900317055 1
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AAI clade 11-16
medoid: GCA 902791865 1
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AAI clade 11-17
medoid: GCA 902774295 1
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AAI clade 11-18
medoid: GCA 903945175 1
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AAI clade 11-19
medoid: GCF 003712195 1
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AAI clade 11-20
medoid: GCA 902801475 1
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AAI clade 11-21
medoid: GCA 017438945 1
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AAI clade 11-22
medoid: GCA 017961145 1
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AAI clade 11-23
medoid: GCA 015060255 1
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AAI clade 11-24
medoid: GCA 017394705 1
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AAI clade 11-25
medoid: GCA 017405965 1
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AAI clade 11-26
medoid: GCF 000025925 1
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AAI clade 11-27
medoid: GCA 016286385 1
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AAI clade 11-28
medoid: GCA 017465575 1
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AAI clade 11-1
medoid: GCA 017447265 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1