AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
    • AAI clade 10-1 medoid: GCA 902595625 1
      • AAI clade 10-1-1 medoid: GCA 902595625 1
      • AAI clade 10-1-2 medoid: GCA 902572475 1
        • AAI clade 10-1-2-1 medoid: GCA 002169755 1
        • AAI clade 10-1-2-2 medoid: GCA 002169935 2
        • AAI clade 10-1-2-3 medoid: GCA 003213115 1
        • AAI clade 10-1-2-4 medoid: GCA 003278125 1
        • AAI clade 10-1-2-5 medoid: GCA 003281795 1
        • AAI clade 10-1-2-6 medoid: GCA 003282835 1
        • AAI clade 10-1-2-7 medoid: GCA 902515355 1
        • AAI clade 10-1-2-8 medoid: GCA 902517535 1
        • AAI clade 10-1-2-9 medoid: GCA 902523095 1
        • AAI clade 10-1-2-10 medoid: GCA 902523185 1
        • AAI clade 10-1-2-11 medoid: GCA 902624885 1
        • AAI clade 10-1-2-12 medoid: GCA 902530215 1
        • AAI clade 10-1-2-13 medoid: GCA 902535255 1
        • AAI clade 10-1-2-14 medoid: GCA 902544345 1
        • AAI clade 10-1-2-15 medoid: GCA 902536385 1
        • AAI clade 10-1-2-16 medoid: GCA 902613545 1
          6 datasets: GCA 902539235 1 (AAI: 81.35%), GCA 902543665 1 (AAI: 71.21%), GCA 902590505 1 (AAI: 89.45%), GCA 902613545 1 (AAI: 100.0%), GCA 902619495 1 (AAI: 71.81%), and GCA 902625945 1 (AAI: 71.47%)
        • AAI clade 10-1-2-17 medoid: GCA 902547825 1
        • AAI clade 10-1-2-18 medoid: GCA 902548045 1
        • AAI clade 10-1-2-19 medoid: GCA 902549495 1
        • AAI clade 10-1-2-20 medoid: GCA 902551865 1
        • AAI clade 10-1-2-21 medoid: GCA 902624195 1
        • AAI clade 10-1-2-22 medoid: GCA 902572475 1
        • AAI clade 10-1-2-23 medoid: GCA 902563575 1
        • AAI clade 10-1-2-24 medoid: GCA 902567685 1
        • AAI clade 10-1-2-25 medoid: GCA 902569465 1
        • AAI clade 10-1-2-26 medoid: GCA 902574045 1
        • AAI clade 10-1-2-27 medoid: GCA 902577575 1
        • AAI clade 10-1-2-28 medoid: GCA 902579115 1
        • AAI clade 10-1-2-29 medoid: GCA 902581775 1
        • AAI clade 10-1-2-30 medoid: GCA 902582345 1
        • AAI clade 10-1-2-31 medoid: GCA 902582875 1
        • AAI clade 10-1-2-32 medoid: GCA 902588625 1
        • AAI clade 10-1-2-33 medoid: GCA 902598315 1
        • AAI clade 10-1-2-34 medoid: GCA 902602655 1
        • AAI clade 10-1-2-35 medoid: GCA 902604055 1
        • AAI clade 10-1-2-36 medoid: GCA 902606835 1
        • AAI clade 10-1-2-37 medoid: GCA 902610115 1
        • AAI clade 10-1-2-38 medoid: GCA 902610515 1
        • AAI clade 10-1-2-39 medoid: GCA 902612235 1
        • AAI clade 10-1-2-40 medoid: GCA 902616145 1
        • AAI clade 10-1-2-41 medoid: GCA 902619835 1
        • AAI clade 10-1-2-42 medoid: GCA 902620585 1
        • AAI clade 10-1-2-43 medoid: GCA 905612235 1
        • AAI clade 10-1-2-44 medoid: GCA 905612415 1
      • AAI clade 10-1-3 medoid: GCA 902561155 1
    • AAI clade 10-2 medoid: GCA 902602135 1
    • AAI clade 10-3 medoid: GCA 902597515 1
    • AAI clade 10-4 medoid: GCA 902568425 1
    • AAI clade 10-5 medoid: GCA 902624345 1
    • AAI clade 10-6 medoid: GCA 902589395 1
    • AAI clade 10-7 medoid: GCA 902541515 1
    • AAI clade 10-8 medoid: GCA 902535625 1
    • AAI clade 10-9 medoid: GCA 902533965 1
    • AAI clade 10-10 medoid: GCA 902604225 1
    • AAI clade 10-11 medoid: GCA 902599045 1
    • AAI clade 10-12 medoid: GCA 902622795 1
    • AAI clade 10-13 medoid: GCA 902546375 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1