AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 1-2
medoid: GCA 905221215 1
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AAI clade 1-3
medoid: GCF 015326965 1
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AAI clade 1-4
medoid: GCF 900094905 1
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AAI clade 1-5
medoid: GCF 008764295 1
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AAI clade 1-6
medoid: GCA 900551895 1
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AAI clade 1-7
medoid: GCF 009193305 1
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AAI clade 1-8
medoid: GCA 017503135 1
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AAI clade 1-9
medoid: GCA 900552565 1
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AAI clade 1-9-1
medoid: GCF 900637515 1
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AAI clade 1-9-2
medoid: GCF 000233715 2
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AAI clade 1-9-2-1
medoid: GCA 003141955 1
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AAI clade 1-9-2-2
medoid: GCA 000237975 1
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AAI clade 1-9-2-3
medoid: GCF 004369225 1
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AAI clade 1-9-2-4
medoid: GCA 001771575 1
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AAI clade 1-9-2-5
medoid: GCA 003695285 1
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AAI clade 1-9-2-6
medoid: GCA 002419055 1
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AAI clade 1-9-2-7
medoid: GCA 012838175 1
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AAI clade 1-9-2-7-1
medoid: GCA 012838175 1
6 datasets: GCA 002419005 1 (AAI: 50.56%), GCA 003343815 1 (AAI: 47.54%), GCA 012838175 1 (AAI: 100.0%), GCA 012842275 1 (AAI: 47.22%), GCF 002224645 1 (AAI: 60.12%), and GCF 002777255 1 (AAI: 60.83%)
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AAI clade 1-9-2-7-2
medoid: GCA 002878375 1
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AAI clade 1-9-2-7-3
medoid: GCA 007121025 1
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AAI clade 1-9-2-7-4
medoid: GCA 012520575 1
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AAI clade 1-9-2-7-5
medoid: GCA 012842445 1
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AAI clade 1-9-2-7-6
medoid: GCF 015775515 1
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AAI clade 1-9-2-7-1
medoid: GCA 012838175 1
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AAI clade 1-9-2-8
medoid: GCA 002422465 1
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AAI clade 1-9-2-9
medoid: GCA 016190935 1
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AAI clade 1-9-2-10
medoid: GCA 016841725 1
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AAI clade 1-9-2-11
medoid: GCA 003164635 1
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AAI clade 1-9-2-12
medoid: GCA 003530255 1
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AAI clade 1-9-2-13
medoid: GCA 014896535 1
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AAI clade 1-9-2-14
medoid: GCA 016841905 1
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AAI clade 1-9-2-15
medoid: GCA 018715045 1
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AAI clade 1-9-2-16
medoid: GCA 902766525 1
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AAI clade 1-9-2-17
medoid: GCA 903889795 1
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AAI clade 1-9-2-18
medoid: GCA 903910705 1
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AAI clade 1-9-2-19
medoid: GCF 000017545 1
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AAI clade 1-9-2-1
medoid: GCA 003141955 1
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AAI clade 1-9-3
medoid: GCA 018650845 1
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AAI clade 1-9-4
medoid: GCA 002373045 1
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AAI clade 1-9-5
medoid: GCF 000242435 1
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AAI clade 1-9-6
medoid: GCA 900753045 1
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AAI clade 1-9-7
medoid: GCF 900100785 1
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AAI clade 1-9-8
medoid: GCF 000014725 1
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AAI clade 1-9-9
medoid: GCA 017939945 1
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AAI clade 1-9-10
medoid: GCA 900319325 1
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AAI clade 1-9-11
medoid: GCA 002434245 1
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AAI clade 1-9-12
medoid: GCF 900095825 1
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AAI clade 1-9-13
medoid: GCF 003010495 1
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AAI clade 1-9-14
medoid: GCF 002257705 1
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AAI clade 1-9-15
medoid: GCF 000621545 1
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AAI clade 1-9-16
medoid: GCA 900772775 1
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AAI clade 1-9-17
medoid: GCA 017470485 1
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AAI clade 1-9-18
medoid: GCA 017518105 1
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AAI clade 1-9-19
medoid: GCF 000177335 1
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AAI clade 1-9-20
medoid: GCA 019233415 1
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AAI clade 1-9-21
medoid: GCA 902801365 1
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AAI clade 1-9-22
medoid: GCF 003992115 1
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AAI clade 1-9-23
medoid: GCF 014250475 1
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AAI clade 1-9-24
medoid: GCA 900766245 1
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AAI clade 1-9-25
medoid: GCF 000384655 1
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AAI clade 1-9-1
medoid: GCF 900637515 1
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AAI clade 1-10
medoid: GCA 017411305 1
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AAI clade 1-11
medoid: GCF 001465345 1
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AAI clade 1-12
medoid: GCA 900759455 1
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AAI clade 1-13
medoid: GCF 015207245 1
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AAI clade 1-14
medoid: GCA 017960805 1
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AAI clade 1-15
medoid: GCA 001604115 1
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AAI clade 1-16
medoid: GCA 900551775 1
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AAI clade 1-17
medoid: GCA 016929555 1
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AAI clade 1-18
medoid: GCF 004770145 1
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AAI clade 1-19
medoid: GCF 004745505 1
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AAI clade 1-20
medoid: GCA 900761225 1
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AAI clade 1-21
medoid: GCA 900556695 1
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AAI clade 1-22
medoid: GCA 017504995 1
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AAI clade 1-23
medoid: GCA 900550055 1
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AAI clade 1-24
medoid: GCA 017464135 1
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AAI clade 1-25
medoid: GCA 014860805 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1