AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 1-2
medoid: GCA 905221215 1
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AAI clade 1-3
medoid: GCF 015326965 1
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AAI clade 1-4
medoid: GCF 900094905 1
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AAI clade 1-5
medoid: GCF 008764295 1
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AAI clade 1-6
medoid: GCA 900551895 1
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AAI clade 1-7
medoid: GCF 009193305 1
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AAI clade 1-8
medoid: GCA 017503135 1
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AAI clade 1-8-1
medoid: GCF 001487145 1
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AAI clade 1-8-2
medoid: GCF 000183565 1
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AAI clade 1-8-3
medoid: GCF 000421965 1
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AAI clade 1-8-4
medoid: GCF 003287405 1
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AAI clade 1-8-5
medoid: GCA 002378845 1
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AAI clade 1-8-6
medoid: GCA 003150405 1
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AAI clade 1-8-6-1
medoid: GCA 902766785 1
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AAI clade 1-8-6-1-1
medoid: GCA 000158655 1
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AAI clade 1-8-6-1-2
medoid: GCA 002295325 1
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AAI clade 1-8-6-1-3
medoid: GCA 902766785 1
4 datasets: GCA 003150405 1 (AAI: 72.16%), GCA 900552945 1 (AAI: 69.2%), GCA 900762715 1 (AAI: 89.94%), and GCA 902766785 1 (AAI: 100.0%)
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AAI clade 1-8-6-1-4
medoid: GCA 018110785 1
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AAI clade 1-8-6-1-5
medoid: GCA 900757485 1
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AAI clade 1-8-6-1-6
medoid: GCF 904420045 1
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AAI clade 1-8-6-1-1
medoid: GCA 000158655 1
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AAI clade 1-8-6-2
medoid: GCF 900148495 1
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AAI clade 1-8-6-3
medoid: GCA 019115265 1
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AAI clade 1-8-6-4
medoid: GCA 000953215 1
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AAI clade 1-8-6-5
medoid: GCA 017436525 1
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AAI clade 1-8-6-6
medoid: GCA 001790095 1
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AAI clade 1-8-6-7
medoid: GCA 017656335 1
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AAI clade 1-8-6-8
medoid: GCA 009782475 1
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AAI clade 1-8-6-9
medoid: GCA 002293725 1
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AAI clade 1-8-6-10
medoid: GCA 900113995 1
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AAI clade 1-8-6-11
medoid: GCA 002305685 1
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AAI clade 1-8-6-12
medoid: GCA 002345725 1
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AAI clade 1-8-6-13
medoid: GCA 910578255 1
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AAI clade 1-8-6-14
medoid: GCA 002431635 1
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AAI clade 1-8-6-15
medoid: GCA 902373415 1
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AAI clade 1-8-6-16
medoid: GCA 900547385 1
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AAI clade 1-8-6-17
medoid: GCF 000154565 1
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AAI clade 1-8-6-18
medoid: GCF 904419775 1
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AAI clade 1-8-6-19
medoid: GCA 004557455 1
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AAI clade 1-8-6-20
medoid: GCA 009777435 1
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AAI clade 1-8-6-21
medoid: GCA 014384905 1
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AAI clade 1-8-6-22
medoid: GCA 900762805 1
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AAI clade 1-8-6-23
medoid: GCA 017559855 1
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AAI clade 1-8-6-24
medoid: GCA 012520195 1
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AAI clade 1-8-6-25
medoid: GCA 018714125 1
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AAI clade 1-8-6-26
medoid: GCA 012797825 1
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AAI clade 1-8-6-27
medoid: GCA 016303065 1
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AAI clade 1-8-6-28
medoid: GCA 014384885 1
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AAI clade 1-8-6-29
medoid: GCA 017440545 1
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AAI clade 1-8-6-30
medoid: GCA 904502105 1
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AAI clade 1-8-6-31
medoid: GCA 015068345 1
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AAI clade 1-8-6-32
medoid: GCA 015487405 1
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AAI clade 1-8-6-33
medoid: GCA 016281405 1
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AAI clade 1-8-6-34
medoid: GCA 016281805 1
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AAI clade 1-8-6-35
medoid: GCA 016887505 1
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AAI clade 1-8-6-36
medoid: GCA 017396825 1
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AAI clade 1-8-6-37
medoid: GCA 017400345 1
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AAI clade 1-8-6-38
medoid: GCA 017405765 1
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AAI clade 1-8-6-39
medoid: GCA 900543705 1
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AAI clade 1-8-6-40
medoid: GCA 017847875 1
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AAI clade 1-8-6-41
medoid: GCA 017620395 1
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AAI clade 1-8-6-42
medoid: GCA 017547995 1
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AAI clade 1-8-6-43
medoid: GCA 017620525 1
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AAI clade 1-8-6-44
medoid: GCA 900551265 1
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AAI clade 1-8-6-45
medoid: GCA 018830725 1
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AAI clade 1-8-6-46
medoid: GCA 905209135 1
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AAI clade 1-8-6-47
medoid: GCA 900555435 1
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AAI clade 1-8-6-48
medoid: GCF 016901815 1
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AAI clade 1-8-6-49
medoid: GCA 902798695 1
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AAI clade 1-8-6-50
medoid: GCA 902779915 1
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AAI clade 1-8-6-51
medoid: GCA 910585525 1
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AAI clade 1-8-6-52
medoid: GCF 000185505 1
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AAI clade 1-8-6-53
medoid: GCF 001968985 1
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AAI clade 1-8-6-54
medoid: GCF 000953715 1
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AAI clade 1-8-6-55
medoid: GCF 017566145 1
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AAI clade 1-8-6-56
medoid: GCF 004135675 1
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AAI clade 1-8-6-1
medoid: GCA 902766785 1
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AAI clade 1-8-7
medoid: GCA 900555015 1
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AAI clade 1-8-8
medoid: GCA 017549105 1
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AAI clade 1-8-9
medoid: GCA 017415025 1
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AAI clade 1-8-10
medoid: GCA 905215055 1
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AAI clade 1-8-11
medoid: GCA 003521625 1
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AAI clade 1-8-12
medoid: GCA 017507525 1
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AAI clade 1-8-13
medoid: GCA 012523685 1
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AAI clade 1-8-14
medoid: GCA 017428545 1
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AAI clade 1-8-15
medoid: GCA 015066345 1
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AAI clade 1-8-16
medoid: GCF 904419005 1
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AAI clade 1-8-17
medoid: GCA 001941225 1
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AAI clade 1-8-18
medoid: GCA 902785555 1
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AAI clade 1-8-19
medoid: GCA 017503225 1
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AAI clade 1-8-20
medoid: GCA 004558145 1
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AAI clade 1-8-21
medoid: GCA 904501875 1
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AAI clade 1-8-22
medoid: GCA 900314795 1
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AAI clade 1-8-23
medoid: GCA 902792985 1
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AAI clade 1-8-24
medoid: GCA 017440965 1
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AAI clade 1-8-1
medoid: GCF 001487145 1
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AAI clade 1-9
medoid: GCA 900552565 1
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AAI clade 1-10
medoid: GCA 017411305 1
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AAI clade 1-11
medoid: GCF 001465345 1
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AAI clade 1-12
medoid: GCA 900759455 1
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AAI clade 1-13
medoid: GCF 015207245 1
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AAI clade 1-14
medoid: GCA 017960805 1
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AAI clade 1-15
medoid: GCA 001604115 1
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AAI clade 1-16
medoid: GCA 900551775 1
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AAI clade 1-17
medoid: GCA 016929555 1
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AAI clade 1-18
medoid: GCF 004770145 1
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AAI clade 1-19
medoid: GCF 004745505 1
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AAI clade 1-20
medoid: GCA 900761225 1
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AAI clade 1-21
medoid: GCA 900556695 1
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AAI clade 1-22
medoid: GCA 017504995 1
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AAI clade 1-23
medoid: GCA 900550055 1
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AAI clade 1-24
medoid: GCA 017464135 1
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AAI clade 1-25
medoid: GCA 014860805 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1