AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
    • AAI clade 1-1 medoid: GCA 900546775 1
    • AAI clade 1-2 medoid: GCA 905221215 1
    • AAI clade 1-3 medoid: GCF 015326965 1
    • AAI clade 1-4 medoid: GCF 900094905 1
    • AAI clade 1-5 medoid: GCF 008764295 1
    • AAI clade 1-6 medoid: GCA 900551895 1
    • AAI clade 1-7 medoid: GCF 009193305 1
    • AAI clade 1-8 medoid: GCA 017503135 1
      • AAI clade 1-8-1 medoid: GCF 001487145 1
      • AAI clade 1-8-2 medoid: GCF 000183565 1
      • AAI clade 1-8-3 medoid: GCF 000421965 1
      • AAI clade 1-8-4 medoid: GCF 003287405 1
      • AAI clade 1-8-5 medoid: GCA 002378845 1
      • AAI clade 1-8-6 medoid: GCA 003150405 1
      • AAI clade 1-8-7 medoid: GCA 900555015 1
      • AAI clade 1-8-8 medoid: GCA 017549105 1
      • AAI clade 1-8-9 medoid: GCA 017415025 1
      • AAI clade 1-8-10 medoid: GCA 905215055 1
      • AAI clade 1-8-11 medoid: GCA 003521625 1
      • AAI clade 1-8-12 medoid: GCA 017507525 1
        • AAI clade 1-8-12-1 medoid: GCF 900142005 1
        • AAI clade 1-8-12-2 medoid: GCA 017507525 1
        • AAI clade 1-8-12-3 medoid: GCA 002841405 1
        • AAI clade 1-8-12-4 medoid: GCA 017416985 1
        • AAI clade 1-8-12-5 medoid: GCA 017502845 1
          • AAI clade 1-8-12-5-1 medoid: GCA 012511915 1
          • AAI clade 1-8-12-5-2 medoid: GCA 014385105 1
          • AAI clade 1-8-12-5-3 medoid: GCA 015068705 1
          • AAI clade 1-8-12-5-4 medoid: GCA 015069095 1
          • AAI clade 1-8-12-5-5 medoid: GCA 017502845 1
            2 datasets: GCA 017436905 1 (AAI: 76.5%) and GCA 017502845 1 (AAI: 100.0%)
          • AAI clade 1-8-12-5-6 medoid: GCA 900757255 1
          • AAI clade 1-8-12-5-7 medoid: GCF 002252565 1
          • AAI clade 1-8-12-5-8 medoid: GCF 018918095 1
        • AAI clade 1-8-12-6 medoid: GCA 017442155 1
        • AAI clade 1-8-12-7 medoid: GCA 017397885 1
        • AAI clade 1-8-12-8 medoid: GCA 017523005 1
        • AAI clade 1-8-12-9 medoid: GCA 900550065 1
      • AAI clade 1-8-13 medoid: GCA 012523685 1
      • AAI clade 1-8-14 medoid: GCA 017428545 1
      • AAI clade 1-8-15 medoid: GCA 015066345 1
      • AAI clade 1-8-16 medoid: GCF 904419005 1
      • AAI clade 1-8-17 medoid: GCA 001941225 1
      • AAI clade 1-8-18 medoid: GCA 902785555 1
      • AAI clade 1-8-19 medoid: GCA 017503225 1
      • AAI clade 1-8-20 medoid: GCA 004558145 1
      • AAI clade 1-8-21 medoid: GCA 904501875 1
      • AAI clade 1-8-22 medoid: GCA 900314795 1
      • AAI clade 1-8-23 medoid: GCA 902792985 1
      • AAI clade 1-8-24 medoid: GCA 017440965 1
    • AAI clade 1-9 medoid: GCA 900552565 1
    • AAI clade 1-10 medoid: GCA 017411305 1
    • AAI clade 1-11 medoid: GCF 001465345 1
    • AAI clade 1-12 medoid: GCA 900759455 1
    • AAI clade 1-13 medoid: GCF 015207245 1
    • AAI clade 1-14 medoid: GCA 017960805 1
    • AAI clade 1-15 medoid: GCA 001604115 1
    • AAI clade 1-16 medoid: GCA 900551775 1
    • AAI clade 1-17 medoid: GCA 016929555 1
    • AAI clade 1-18 medoid: GCF 004770145 1
    • AAI clade 1-19 medoid: GCF 004745505 1
    • AAI clade 1-20 medoid: GCA 900761225 1
    • AAI clade 1-21 medoid: GCA 900556695 1
    • AAI clade 1-22 medoid: GCA 017504995 1
    • AAI clade 1-23 medoid: GCA 900550055 1
    • AAI clade 1-24 medoid: GCA 017464135 1
    • AAI clade 1-25 medoid: GCA 014860805 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1