AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
    • AAI clade 1-1 medoid: GCA 900546775 1
    • AAI clade 1-2 medoid: GCA 905221215 1
    • AAI clade 1-3 medoid: GCF 015326965 1
    • AAI clade 1-4 medoid: GCF 900094905 1
    • AAI clade 1-5 medoid: GCF 008764295 1
    • AAI clade 1-6 medoid: GCA 900551895 1
      • AAI clade 1-6-1 medoid: GCF 013036995 1
      • AAI clade 1-6-2 medoid: GCF 900537995 1
      • AAI clade 1-6-3 medoid: GCF 002234575 2
      • AAI clade 1-6-4 medoid: GCA 902362455 1
      • AAI clade 1-6-5 medoid: GCA 900551895 1
      • AAI clade 1-6-6 medoid: GCF 000296385 1
      • AAI clade 1-6-7 medoid: GCF 018919065 1
      • AAI clade 1-6-8 medoid: GCA 910575075 1
      • AAI clade 1-6-9 medoid: GCF 002159505 1
      • AAI clade 1-6-10 medoid: GCA 910574885 1
      • AAI clade 1-6-11 medoid: GCA 902762905 1
      • AAI clade 1-6-12 medoid: GCA 910575055 1
      • AAI clade 1-6-13 medoid: GCA 004562915 1
      • AAI clade 1-6-14 medoid: GCA 900539115 1
      • AAI clade 1-6-15 medoid: GCA 910579085 1
      • AAI clade 1-6-16 medoid: GCA 002434335 1
      • AAI clade 1-6-17 medoid: GCA 902362875 1
      • AAI clade 1-6-18 medoid: GCA 017480495 1
      • AAI clade 1-6-19 medoid: GCF 900218035 1
      • AAI clade 1-6-20 medoid: GCF 003478505 1
        • AAI clade 1-6-20-1 medoid: GCA 001304875 1
        • AAI clade 1-6-20-2 medoid: GCA 018377235 1
        • AAI clade 1-6-20-3 medoid: GCA 002309675 1
        • AAI clade 1-6-20-4 medoid: GCA 002315255 1
        • AAI clade 1-6-20-5 medoid: GCA 002315555 1
        • AAI clade 1-6-20-6 medoid: GCA 002371295 1
        • AAI clade 1-6-20-7 medoid: GCA 002892395 1
        • AAI clade 1-6-20-8 medoid: GCA 003478355 1
        • AAI clade 1-6-20-9 medoid: GCA 003478935 1
        • AAI clade 1-6-20-10 medoid: GCA 910586205 1
        • AAI clade 1-6-20-11 medoid: GCA 014385265 1
        • AAI clade 1-6-20-12 medoid: GCA 017387285 1
        • AAI clade 1-6-20-13 medoid: GCA 017442865 1
        • AAI clade 1-6-20-14 medoid: GCA 017446045 1
        • AAI clade 1-6-20-15 medoid: GCA 017449925 1
        • AAI clade 1-6-20-16 medoid: GCA 017455005 1
        • AAI clade 1-6-20-17 medoid: GCA 017460845 1
        • AAI clade 1-6-20-18 medoid: GCA 017479935 1
        • AAI clade 1-6-20-19 medoid: GCA 017624115 1
        • AAI clade 1-6-20-20 medoid: GCA 018378255 1
        • AAI clade 1-6-20-21 medoid: GCA 900045905 1
        • AAI clade 1-6-20-22 medoid: GCA 900321915 1
        • AAI clade 1-6-20-23 medoid: GCF 003478505 1
        • AAI clade 1-6-20-24 medoid: GCF 900626075 1
          3 datasets: GCA 900547735 1 (AAI: 94.69%), GCF 000466485 1 (AAI: 80.2%), and GCF 900626075 1 (AAI: 100.0%)
        • AAI clade 1-6-20-25 medoid: GCA 900772695 1
        • AAI clade 1-6-20-26 medoid: GCA 902363445 1
        • AAI clade 1-6-20-27 medoid: GCA 902770965 1
        • AAI clade 1-6-20-28 medoid: GCA 902783095 1
        • AAI clade 1-6-20-29 medoid: GCA 902783295 1
        • AAI clade 1-6-20-30 medoid: GCA 902790095 1
        • AAI clade 1-6-20-31 medoid: GCA 902796795 1
        • AAI clade 1-6-20-32 medoid: GCA 910574345 1
        • AAI clade 1-6-20-33 medoid: GCA 910575275 1
        • AAI clade 1-6-20-34 medoid: GCA 910585645 1
        • AAI clade 1-6-20-35 medoid: GCA 910585435 1
        • AAI clade 1-6-20-36 medoid: GCA 910584845 1
        • AAI clade 1-6-20-37 medoid: GCA 910586315 1
        • AAI clade 1-6-20-38 medoid: GCA 910588815 1
        • AAI clade 1-6-20-39 medoid: GCF 000235505 1
        • AAI clade 1-6-20-40 medoid: GCF 000242235 1
        • AAI clade 1-6-20-41 medoid: GCF 002160755 1
        • AAI clade 1-6-20-42 medoid: GCF 003014445 1
        • AAI clade 1-6-20-43 medoid: GCF 003024715 1
        • AAI clade 1-6-20-44 medoid: GCF 003435375 1
      • AAI clade 1-6-21 medoid: GCA 905212195 1
      • AAI clade 1-6-22 medoid: GCA 014384995 1
      • AAI clade 1-6-23 medoid: GCF 002222595 2
      • AAI clade 1-6-24 medoid: GCA 004294845 1
      • AAI clade 1-6-25 medoid: GCA 902788035 1
      • AAI clade 1-6-26 medoid: GCA 017556805 1
      • AAI clade 1-6-27 medoid: GCA 902762955 1
      • AAI clade 1-6-28 medoid: GCA 900540475 1
      • AAI clade 1-6-29 medoid: GCA 002369135 1
      • AAI clade 1-6-30 medoid: GCF 003461625 1
      • AAI clade 1-6-31 medoid: GCA 902761665 1
      • AAI clade 1-6-32 medoid: GCA 910574805 1
      • AAI clade 1-6-33 medoid: GCF 002161065 1
      • AAI clade 1-6-34 medoid: GCA 910584595 1
      • AAI clade 1-6-35 medoid: GCA 009779835 1
      • AAI clade 1-6-36 medoid: GCA 910576325 1
      • AAI clade 1-6-37 medoid: GCF 004340975 1
      • AAI clade 1-6-38 medoid: GCA 910574895 1
    • AAI clade 1-7 medoid: GCF 009193305 1
    • AAI clade 1-8 medoid: GCA 017503135 1
    • AAI clade 1-9 medoid: GCA 900552565 1
    • AAI clade 1-10 medoid: GCA 017411305 1
    • AAI clade 1-11 medoid: GCF 001465345 1
    • AAI clade 1-12 medoid: GCA 900759455 1
    • AAI clade 1-13 medoid: GCF 015207245 1
    • AAI clade 1-14 medoid: GCA 017960805 1
    • AAI clade 1-15 medoid: GCA 001604115 1
    • AAI clade 1-16 medoid: GCA 900551775 1
    • AAI clade 1-17 medoid: GCA 016929555 1
    • AAI clade 1-18 medoid: GCF 004770145 1
    • AAI clade 1-19 medoid: GCF 004745505 1
    • AAI clade 1-20 medoid: GCA 900761225 1
    • AAI clade 1-21 medoid: GCA 900556695 1
    • AAI clade 1-22 medoid: GCA 017504995 1
    • AAI clade 1-23 medoid: GCA 900550055 1
    • AAI clade 1-24 medoid: GCA 017464135 1
    • AAI clade 1-25 medoid: GCA 014860805 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1