AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 1-2
medoid: GCA 905221215 1
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AAI clade 1-3
medoid: GCF 015326965 1
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AAI clade 1-3-1
medoid: GCF 013359905 1
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AAI clade 1-3-1-1
medoid: GCF 008386395 1
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AAI clade 1-3-1-2
medoid: GCF 900102085 1
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AAI clade 1-3-1-3
medoid: GCF 013359905 1
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AAI clade 1-3-1-3-1
medoid: GCF 000499205 1
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AAI clade 1-3-1-3-2
medoid: GCF 001280595 1
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AAI clade 1-3-1-3-3
medoid: GCF 001426865 1
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AAI clade 1-3-1-3-4
medoid: GCF 014844075 1
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AAI clade 1-3-1-3-5
medoid: GCF 003268635 1
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AAI clade 1-3-1-3-6
medoid: GCF 013359905 1
3 datasets: GCF 003287275 1 (AAI: 98.37%), GCF 013359905 1 (AAI: 100.0%), and GCF 013401555 1 (AAI: 97.23%)
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AAI clade 1-3-1-3-7
medoid: GCF 004000925 1
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AAI clade 1-3-1-3-8
medoid: GCF 013359935 1
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AAI clade 1-3-1-3-9
medoid: GCF 900109515 1
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AAI clade 1-3-1-3-1
medoid: GCF 000499205 1
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AAI clade 1-3-1-1
medoid: GCF 008386395 1
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AAI clade 1-3-2
medoid: GCA 003722315 1
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AAI clade 1-3-3
medoid: GCF 001719045 1
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AAI clade 1-3-4
medoid: GCF 000758665 1
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AAI clade 1-3-5
medoid: GCF 000444055 1
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AAI clade 1-3-6
medoid: GCF 016055185 1
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AAI clade 1-3-7
medoid: GCA 002067515 1
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AAI clade 1-3-8
medoid: GCF 000012865 1
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AAI clade 1-3-9
medoid: GCF 000512895 1
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AAI clade 1-3-10
medoid: GCA 003158295 1
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AAI clade 1-3-11
medoid: GCF 014502795 1
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AAI clade 1-3-12
medoid: GCF 900021165 1
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AAI clade 1-3-13
medoid: GCF 004000805 1
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AAI clade 1-3-14
medoid: GCF 013618475 1
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AAI clade 1-3-15
medoid: GCA 016841245 1
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AAI clade 1-3-16
medoid: GCA 018333635 1
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AAI clade 1-3-17
medoid: GCA 002382755 1
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AAI clade 1-3-18
medoid: GCF 000422905 1
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AAI clade 1-3-19
medoid: GCF 001399685 1
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AAI clade 1-3-20
medoid: GCA 902609885 1
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AAI clade 1-3-21
medoid: GCA 013036095 1
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AAI clade 1-3-22
medoid: GCF 004340785 1
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AAI clade 1-3-23
medoid: GCA 003670455 1
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AAI clade 1-3-24
medoid: GCF 001552655 1
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AAI clade 1-3-25
medoid: GCF 018403225 1
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AAI clade 1-3-26
medoid: GCF 000024285 1
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AAI clade 1-3-27
medoid: GCA 018673955 1
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AAI clade 1-3-28
medoid: GCF 001274715 1
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AAI clade 1-3-29
medoid: GCF 015326965 1
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AAI clade 1-3-30
medoid: GCF 003013405 1
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AAI clade 1-3-31
medoid: GCF 003591485 1
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AAI clade 1-3-32
medoid: GCF 000422485 1
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AAI clade 1-3-33
medoid: GCF 000179615 1
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AAI clade 1-3-34
medoid: GCF 000245555 1
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AAI clade 1-3-35
medoid: GCF 014212135 1
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AAI clade 1-3-36
medoid: GCF 000411255 1
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AAI clade 1-3-37
medoid: GCF 014841135 1
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AAI clade 1-3-38
medoid: GCF 001682865 1
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AAI clade 1-3-39
medoid: GCF 014107495 1
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AAI clade 1-3-40
medoid: GCF 018966525 1
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AAI clade 1-3-41
medoid: GCF 002264395 1
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AAI clade 1-3-42
medoid: GCF 900156375 1
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AAI clade 1-3-43
medoid: GCF 001421015 2
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AAI clade 1-3-44
medoid: GCF 018403285 1
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AAI clade 1-3-45
medoid: GCF 006265175 1
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AAI clade 1-3-46
medoid: GCF 900116125 1
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AAI clade 1-3-1
medoid: GCF 013359905 1
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AAI clade 1-4
medoid: GCF 900094905 1
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AAI clade 1-5
medoid: GCF 008764295 1
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AAI clade 1-6
medoid: GCA 900551895 1
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AAI clade 1-7
medoid: GCF 009193305 1
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AAI clade 1-8
medoid: GCA 017503135 1
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AAI clade 1-9
medoid: GCA 900552565 1
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AAI clade 1-10
medoid: GCA 017411305 1
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AAI clade 1-11
medoid: GCF 001465345 1
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AAI clade 1-12
medoid: GCA 900759455 1
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AAI clade 1-13
medoid: GCF 015207245 1
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AAI clade 1-14
medoid: GCA 017960805 1
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AAI clade 1-15
medoid: GCA 001604115 1
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AAI clade 1-16
medoid: GCA 900551775 1
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AAI clade 1-17
medoid: GCA 016929555 1
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AAI clade 1-18
medoid: GCF 004770145 1
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AAI clade 1-19
medoid: GCF 004745505 1
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AAI clade 1-20
medoid: GCA 900761225 1
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AAI clade 1-21
medoid: GCA 900556695 1
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AAI clade 1-22
medoid: GCA 017504995 1
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AAI clade 1-23
medoid: GCA 900550055 1
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AAI clade 1-24
medoid: GCA 017464135 1
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AAI clade 1-25
medoid: GCA 014860805 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1