AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 1-2
medoid: GCA 905221215 1
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AAI clade 1-3
medoid: GCF 015326965 1
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AAI clade 1-4
medoid: GCF 900094905 1
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AAI clade 1-5
medoid: GCF 008764295 1
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AAI clade 1-6
medoid: GCA 900551895 1
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AAI clade 1-7
medoid: GCF 009193305 1
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AAI clade 1-8
medoid: GCA 017503135 1
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AAI clade 1-9
medoid: GCA 900552565 1
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AAI clade 1-10
medoid: GCA 017411305 1
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AAI clade 1-11
medoid: GCF 001465345 1
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AAI clade 1-12
medoid: GCA 900759455 1
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AAI clade 1-13
medoid: GCF 015207245 1
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AAI clade 1-14
medoid: GCA 017960805 1
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AAI clade 1-15
medoid: GCA 001604115 1
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AAI clade 1-16
medoid: GCA 900551775 1
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AAI clade 1-17
medoid: GCA 016929555 1
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AAI clade 1-18
medoid: GCF 004770145 1
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AAI clade 1-19
medoid: GCF 004745505 1
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AAI clade 1-20
medoid: GCA 900761225 1
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AAI clade 1-21
medoid: GCA 900556695 1
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AAI clade 1-22
medoid: GCA 017504995 1
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AAI clade 1-23
medoid: GCA 900550055 1
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AAI clade 1-24
medoid: GCA 017464135 1
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AAI clade 1-24-1
medoid: GCA 900556885 1
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AAI clade 1-24-2
medoid: GCA 002413865 1
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AAI clade 1-24-3
medoid: GCA 017511645 1
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AAI clade 1-24-3-1
medoid: GCA 017464135 1
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AAI clade 1-24-3-2
medoid: GCA 017511645 1
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AAI clade 1-24-3-2-1
medoid: GCA 017536895 1
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AAI clade 1-24-3-2-2
medoid: GCA 017511645 1
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AAI clade 1-24-3-2-2-1
medoid: GCA 017511645 1
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AAI clade 1-24-3-2-2-1-1
medoid: GCA 017511645 1
8 datasets: GCA 002363125 1 (AAI: 71.43%), GCA 017406775 1 (AAI: 66.75%), GCA 017406905 1 (AAI: 67.58%), GCA 017421325 1 (AAI: 72.68%), GCA 017511645 1 (AAI: 100.0%), GCA 017545525 1 (AAI: 66.61%), GCA 902761145 1 (AAI: 69.07%), and GCF 004138395 1 (AAI: 71.92%)
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AAI clade 1-24-3-2-2-1-2
medoid: GCA 017431725 1
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AAI clade 1-24-3-2-2-1-1
medoid: GCA 017511645 1
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AAI clade 1-24-3-2-2-2
medoid: GCA 017421685 1
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AAI clade 1-24-3-2-2-1
medoid: GCA 017511645 1
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AAI clade 1-24-3-2-3
medoid: GCA 017510425 1
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AAI clade 1-24-3-2-4
medoid: GCA 009777315 1
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AAI clade 1-24-3-2-5
medoid: GCA 009778675 1
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AAI clade 1-24-3-2-6
medoid: GCA 009785325 1
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AAI clade 1-24-3-2-7
medoid: GCA 016286785 1
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AAI clade 1-24-3-2-8
medoid: GCA 017404325 1
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AAI clade 1-24-3-2-9
medoid: GCA 017404795 1
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AAI clade 1-24-3-2-10
medoid: GCA 017406565 1
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AAI clade 1-24-3-2-11
medoid: GCA 017431955 1
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AAI clade 1-24-3-2-12
medoid: GCA 017511205 1
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AAI clade 1-24-3-2-13
medoid: GCA 017511965 1
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AAI clade 1-24-3-2-14
medoid: GCA 017512085 1
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AAI clade 1-24-3-2-15
medoid: GCA 017514665 1
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AAI clade 1-24-3-2-16
medoid: GCA 017514765 1
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AAI clade 1-24-3-2-17
medoid: GCA 017619315 1
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AAI clade 1-24-3-2-18
medoid: GCA 017533605 1
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AAI clade 1-24-3-2-19
medoid: GCA 017652715 1
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AAI clade 1-24-3-2-20
medoid: GCA 017983775 1
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AAI clade 1-24-3-2-1
medoid: GCA 017536895 1
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AAI clade 1-24-3-3
medoid: GCA 017514805 1
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AAI clade 1-24-3-4
medoid: GCA 017455145 1
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AAI clade 1-24-3-5
medoid: GCA 013333135 2
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AAI clade 1-24-3-6
medoid: GCA 009781895 1
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AAI clade 1-24-3-7
medoid: GCF 004138405 1
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AAI clade 1-24-3-8
medoid: GCA 017510925 1
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AAI clade 1-24-3-9
medoid: GCA 017512095 1
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AAI clade 1-24-3-1
medoid: GCA 017464135 1
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AAI clade 1-24-1
medoid: GCA 900556885 1
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AAI clade 1-25
medoid: GCA 014860805 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1