AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
    • AAI clade 1-1 medoid: GCA 900546775 1
    • AAI clade 1-2 medoid: GCA 905221215 1
    • AAI clade 1-3 medoid: GCF 015326965 1
    • AAI clade 1-4 medoid: GCF 900094905 1
    • AAI clade 1-5 medoid: GCF 008764295 1
    • AAI clade 1-6 medoid: GCA 900551895 1
    • AAI clade 1-7 medoid: GCF 009193305 1
    • AAI clade 1-8 medoid: GCA 017503135 1
    • AAI clade 1-9 medoid: GCA 900552565 1
    • AAI clade 1-10 medoid: GCA 017411305 1
    • AAI clade 1-11 medoid: GCF 001465345 1
    • AAI clade 1-12 medoid: GCA 900759455 1
    • AAI clade 1-13 medoid: GCF 015207245 1
    • AAI clade 1-14 medoid: GCA 017960805 1
    • AAI clade 1-15 medoid: GCA 001604115 1
    • AAI clade 1-16 medoid: GCA 900551775 1
    • AAI clade 1-17 medoid: GCA 016929555 1
    • AAI clade 1-18 medoid: GCF 004770145 1
    • AAI clade 1-19 medoid: GCF 004745505 1
    • AAI clade 1-20 medoid: GCA 900761225 1
    • AAI clade 1-21 medoid: GCA 900556695 1
    • AAI clade 1-22 medoid: GCA 017504995 1
    • AAI clade 1-23 medoid: GCA 900550055 1
      • AAI clade 1-23-1 medoid: GCA 900550055 1
        • AAI clade 1-23-1-1 medoid: GCA 900556585 1
        • AAI clade 1-23-1-2 medoid: GCF 900184265 1
          • AAI clade 1-23-1-2-1 medoid: GCA 015062615 1
          • AAI clade 1-23-1-2-2 medoid: GCA 905234785 1
          • AAI clade 1-23-1-2-3 medoid: GCF 000236865 1
          • AAI clade 1-23-1-2-4 medoid: GCA 009783245 1
          • AAI clade 1-23-1-2-5 medoid: GCA 003612515 1
          • AAI clade 1-23-1-2-6 medoid: GCA 004555335 1
          • AAI clade 1-23-1-2-7 medoid: GCA 009781535 1
          • AAI clade 1-23-1-2-8 medoid: GCA 009782615 1
          • AAI clade 1-23-1-2-9 medoid: GCA 015062635 1
          • AAI clade 1-23-1-2-10 medoid: GCA 017431165 1
          • AAI clade 1-23-1-2-11 medoid: GCA 017559045 1
          • AAI clade 1-23-1-2-12 medoid: GCA 017515355 1
          • AAI clade 1-23-1-2-13 medoid: GCA 017945865 1
          • AAI clade 1-23-1-2-14 medoid: GCA 017960005 1
            1 dataset: GCA 017960005 1 (AAI: 100.0%)
          • AAI clade 1-23-1-2-15 medoid: GCA 018715935 1
          • AAI clade 1-23-1-2-16 medoid: GCA 018712955 1
          • AAI clade 1-23-1-2-17 medoid: GCF 900199375 1
          • AAI clade 1-23-1-2-18 medoid: GCF 002899695 1
          • AAI clade 1-23-1-2-19 medoid: GCF 000814825 1
          • AAI clade 1-23-1-2-20 medoid: GCF 003725295 1
          • AAI clade 1-23-1-2-21 medoid: GCA 900554945 1
          • AAI clade 1-23-1-2-22 medoid: GCF 011038975 1
          • AAI clade 1-23-1-2-23 medoid: GCA 902779135 1
          • AAI clade 1-23-1-2-24 medoid: GCA 903789375 1
          • AAI clade 1-23-1-2-25 medoid: GCA 910588905 1
          • AAI clade 1-23-1-2-26 medoid: GCF 011039075 1
          • AAI clade 1-23-1-2-27 medoid: GCA 910585565 1
          • AAI clade 1-23-1-2-28 medoid: GCF 000023885 1
          • AAI clade 1-23-1-2-29 medoid: GCF 009834925 2
          • AAI clade 1-23-1-2-30 medoid: GCF 000422625 1
          • AAI clade 1-23-1-2-31 medoid: GCF 003340345 1
          • AAI clade 1-23-1-2-32 medoid: GCF 900240215 1
        • AAI clade 1-23-1-3 medoid: GCA 903862845 1
      • AAI clade 1-23-2 medoid: GCA 902756345 1
    • AAI clade 1-24 medoid: GCA 017464135 1
    • AAI clade 1-25 medoid: GCA 014860805 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1