AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

  • AAI clade 1 medoid: GCA 017502845 1
    • AAI clade 1-1 medoid: GCA 900546775 1
    • AAI clade 1-2 medoid: GCA 905221215 1
    • AAI clade 1-3 medoid: GCF 015326965 1
    • AAI clade 1-4 medoid: GCF 900094905 1
    • AAI clade 1-5 medoid: GCF 008764295 1
    • AAI clade 1-6 medoid: GCA 900551895 1
    • AAI clade 1-7 medoid: GCF 009193305 1
    • AAI clade 1-8 medoid: GCA 017503135 1
    • AAI clade 1-9 medoid: GCA 900552565 1
    • AAI clade 1-10 medoid: GCA 017411305 1
    • AAI clade 1-11 medoid: GCF 001465345 1
    • AAI clade 1-12 medoid: GCA 900759455 1
    • AAI clade 1-13 medoid: GCF 015207245 1
    • AAI clade 1-14 medoid: GCA 017960805 1
    • AAI clade 1-15 medoid: GCA 001604115 1
    • AAI clade 1-16 medoid: GCA 900551775 1
    • AAI clade 1-17 medoid: GCA 016929555 1
    • AAI clade 1-18 medoid: GCF 004770145 1
    • AAI clade 1-19 medoid: GCF 004745505 1
    • AAI clade 1-20 medoid: GCA 900761225 1
    • AAI clade 1-21 medoid: GCA 900556695 1
    • AAI clade 1-22 medoid: GCA 017504995 1
      • AAI clade 1-22-1 medoid: GCA 015064955 1
      • AAI clade 1-22-2 medoid: GCA 017453205 1
      • AAI clade 1-22-3 medoid: GCA 017482355 1
      • AAI clade 1-22-4 medoid: GCA 900544285 1
      • AAI clade 1-22-5 medoid: GCA 017504995 1
      • AAI clade 1-22-6 medoid: GCA 015064185 1
      • AAI clade 1-22-7 medoid: GCA 017381715 1
      • AAI clade 1-22-8 medoid: GCA 017482055 1
      • AAI clade 1-22-9 medoid: GCA 017443595 1
      • AAI clade 1-22-10 medoid: GCA 017411805 1
      • AAI clade 1-22-11 medoid: GCA 017453245 1
        • AAI clade 1-22-11-1 medoid: GCA 002315715 1
        • AAI clade 1-22-11-2 medoid: GCA 015063385 1
        • AAI clade 1-22-11-3 medoid: GCA 017522795 1
        • AAI clade 1-22-11-4 medoid: GCA 017462485 1
        • AAI clade 1-22-11-5 medoid: GCA 017471825 1
        • AAI clade 1-22-11-6 medoid: GCA 017456985 1
        • AAI clade 1-22-11-7 medoid: GCA 017397205 1
        • AAI clade 1-22-11-8 medoid: GCA 017410065 1
        • AAI clade 1-22-11-9 medoid: GCA 017453245 1
          5 datasets: GCA 017453245 1 (AAI: 100.0%), GCA 017456895 1 (AAI: 77.96%), GCA 017467205 1 (AAI: 60.39%), GCA 017508665 1 (AAI: 73.13%), and GCA 017533565 1 (AAI: 63.16%)
        • AAI clade 1-22-11-10 medoid: GCA 017453365 1
        • AAI clade 1-22-11-11 medoid: GCA 017462445 1
        • AAI clade 1-22-11-12 medoid: GCA 017464805 1
        • AAI clade 1-22-11-13 medoid: GCA 017467085 1
        • AAI clade 1-22-11-14 medoid: GCA 017467165 1
        • AAI clade 1-22-11-15 medoid: GCA 017501175 1
        • AAI clade 1-22-11-16 medoid: GCA 017508195 1
        • AAI clade 1-22-11-17 medoid: GCA 017504405 1
        • AAI clade 1-22-11-18 medoid: GCA 017504605 1
        • AAI clade 1-22-11-19 medoid: GCA 017938425 1
        • AAI clade 1-22-11-20 medoid: GCA 017508465 1
        • AAI clade 1-22-11-21 medoid: GCA 017546745 1
        • AAI clade 1-22-11-22 medoid: GCA 017630995 1
        • AAI clade 1-22-11-23 medoid: GCA 902796505 1
        • AAI clade 1-22-11-24 medoid: GCA 905210485 1
      • AAI clade 1-22-12 medoid: GCA 017520825 1
      • AAI clade 1-22-13 medoid: GCA 003150035 1
      • AAI clade 1-22-14 medoid: GCA 017483125 1
      • AAI clade 1-22-15 medoid: GCA 017398595 1
      • AAI clade 1-22-16 medoid: GCA 900757905 1
      • AAI clade 1-22-17 medoid: GCA 017465885 1
      • AAI clade 1-22-18 medoid: GCA 902779285 1
      • AAI clade 1-22-19 medoid: GCA 017547655 1
      • AAI clade 1-22-20 medoid: GCA 017467815 1
      • AAI clade 1-22-21 medoid: GCA 017549925 1
      • AAI clade 1-22-22 medoid: GCA 017536475 1
      • AAI clade 1-22-23 medoid: GCA 017453255 1
    • AAI clade 1-23 medoid: GCA 900550055 1
    • AAI clade 1-24 medoid: GCA 017464135 1
    • AAI clade 1-25 medoid: GCA 014860805 1
  • AAI clade 2 medoid: GCA 002434265 1
  • AAI clade 3 medoid: GCA 013002175 1
  • AAI clade 4 medoid: GCA 900110395 1
  • AAI clade 5 medoid: GCA 012798955 1
  • AAI clade 6 medoid: GCA 013415575 1
  • AAI clade 7 medoid: GCF 008638345 1
  • AAI clade 8 medoid: GCF 000807255 1
  • AAI clade 9 medoid: GCF 001050135 1
  • AAI clade 10 medoid: GCA 002717245 1
  • AAI clade 11 medoid: GCA 017478625 1
  • AAI clade 12 medoid: GCA 009773355 1
  • AAI clade 13 medoid: GCA 905200435 1
  • AAI clade 14 medoid: GCA 017516885 1
  • AAI clade 15 medoid: GCA 004321885 1
  • AAI clade 16 medoid: GCA 905236305 1
  • AAI clade 17 medoid: GCA 017648525 1
  • AAI clade 18 medoid: GCA 019113065 1
  • AAI clade 19 medoid: GCA 016795075 1
  • AAI clade 20 medoid: GCF 001467025 1
  • AAI clade 21 medoid: GCA 017642855 1
  • AAI clade 22 medoid: GCA 017408305 1
  • AAI clade 23 medoid: GCA 002436405 1