AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: GCA 017502845 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 1-2
medoid: GCA 905221215 1
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AAI clade 1-3
medoid: GCF 015326965 1
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AAI clade 1-4
medoid: GCF 900094905 1
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AAI clade 1-5
medoid: GCF 008764295 1
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AAI clade 1-6
medoid: GCA 900551895 1
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AAI clade 1-7
medoid: GCF 009193305 1
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AAI clade 1-8
medoid: GCA 017503135 1
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AAI clade 1-9
medoid: GCA 900552565 1
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AAI clade 1-10
medoid: GCA 017411305 1
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AAI clade 1-11
medoid: GCF 001465345 1
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AAI clade 1-12
medoid: GCA 900759455 1
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AAI clade 1-13
medoid: GCF 015207245 1
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AAI clade 1-14
medoid: GCA 017960805 1
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AAI clade 1-15
medoid: GCA 001604115 1
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AAI clade 1-16
medoid: GCA 900551775 1
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AAI clade 1-17
medoid: GCA 016929555 1
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AAI clade 1-17-1
medoid: GCF 000421605 1
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AAI clade 1-17-2
medoid: GCF 009731355 2
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AAI clade 1-17-3
medoid: GCA 004377005 1
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AAI clade 1-17-4
medoid: GCA 018823005 1
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AAI clade 1-17-5
medoid: GCA 018897535 1
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AAI clade 1-17-6
medoid: GCA 016212165 1
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AAI clade 1-17-7
medoid: GCA 018053845 1
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AAI clade 1-17-8
medoid: GCA 002840645 1
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AAI clade 1-17-9
medoid: GCA 017411945 1
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AAI clade 1-17-10
medoid: GCA 001541255 1
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AAI clade 1-17-11
medoid: GCF 004339245 1
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AAI clade 1-17-12
medoid: GCF 018501225 1
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AAI clade 1-17-13
medoid: GCA 005116815 1
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AAI clade 1-17-14
medoid: GCA 002840435 1
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AAI clade 1-17-14-1
medoid: GCA 007244375 1
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AAI clade 1-17-14-2
medoid: GCA 002069765 1
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AAI clade 1-17-14-3
medoid: GCA 001873755 1
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AAI clade 1-17-14-4
medoid: GCA 017860985 1
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AAI clade 1-17-14-5
medoid: GCA 012729055 1
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AAI clade 1-17-14-6
medoid: GCA 002382045 1
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AAI clade 1-17-14-7
medoid: GCA 002402545 1
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AAI clade 1-17-14-8
medoid: GCA 017993615 1
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AAI clade 1-17-14-9
medoid: GCA 003139775 1
4 datasets: GCA 002479215 1 (AAI: 61.77%), GCA 002840555 1 (AAI: 66.31%), GCA 003139775 1 (AAI: 100.0%), and GCA 003141615 1 (AAI: 75.6%)
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AAI clade 1-17-14-10
medoid: GCA 002840565 1
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AAI clade 1-17-14-11
medoid: GCA 003142835 1
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AAI clade 1-17-14-12
medoid: GCA 903904655 1
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AAI clade 1-17-14-13
medoid: GCA 011046295 1
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AAI clade 1-17-14-14
medoid: GCA 012522275 1
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AAI clade 1-17-14-15
medoid: GCA 013153095 1
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AAI clade 1-17-14-16
medoid: GCA 016208805 1
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AAI clade 1-17-14-17
medoid: GCA 017998915 1
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AAI clade 1-17-14-18
medoid: GCA 903911225 1
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AAI clade 1-17-14-1
medoid: GCA 007244375 1
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AAI clade 1-17-15
medoid: GCA 015654835 1
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AAI clade 1-17-16
medoid: GCA 016933025 1
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AAI clade 1-17-17
medoid: GCA 003426165 1
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AAI clade 1-17-18
medoid: GCA 002085355 1
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AAI clade 1-17-19
medoid: GCA 016214845 1
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AAI clade 1-17-20
medoid: GCA 012515615 1
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AAI clade 1-17-21
medoid: GCA 013349295 1
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AAI clade 1-17-22
medoid: GCA 001799615 1
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AAI clade 1-17-23
medoid: GCA 903925005 1
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AAI clade 1-17-24
medoid: GCA 015233335 1
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AAI clade 1-17-25
medoid: GCA 003153775 1
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AAI clade 1-17-26
medoid: GCF 000443995 1
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AAI clade 1-17-27
medoid: GCA 015903945 1
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AAI clade 1-17-28
medoid: GCA 015232455 1
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AAI clade 1-17-29
medoid: GCA 002436105 1
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AAI clade 1-17-30
medoid: GCF 000204255 1
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AAI clade 1-17-31
medoid: GCA 002746685 1
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AAI clade 1-17-32
medoid: GCA 903912525 1
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AAI clade 1-17-33
medoid: GCA 003641695 1
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AAI clade 1-17-34
medoid: GCA 017405875 1
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AAI clade 1-17-1
medoid: GCF 000421605 1
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AAI clade 1-18
medoid: GCF 004770145 1
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AAI clade 1-19
medoid: GCF 004745505 1
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AAI clade 1-20
medoid: GCA 900761225 1
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AAI clade 1-21
medoid: GCA 900556695 1
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AAI clade 1-22
medoid: GCA 017504995 1
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AAI clade 1-23
medoid: GCA 900550055 1
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AAI clade 1-24
medoid: GCA 017464135 1
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AAI clade 1-25
medoid: GCA 014860805 1
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AAI clade 1-1
medoid: GCA 900546775 1
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AAI clade 2
medoid: GCA 002434265 1
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AAI clade 3
medoid: GCA 013002175 1
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AAI clade 4
medoid: GCA 900110395 1
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AAI clade 5
medoid: GCA 012798955 1
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AAI clade 6
medoid: GCA 013415575 1
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AAI clade 7
medoid: GCF 008638345 1
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AAI clade 8
medoid: GCF 000807255 1
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AAI clade 9
medoid: GCF 001050135 1
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AAI clade 10
medoid: GCA 002717245 1
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AAI clade 11
medoid: GCA 017478625 1
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AAI clade 12
medoid: GCA 009773355 1
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AAI clade 13
medoid: GCA 905200435 1
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AAI clade 14
medoid: GCA 017516885 1
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AAI clade 15
medoid: GCA 004321885 1
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AAI clade 16
medoid: GCA 905236305 1
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AAI clade 17
medoid: GCA 017648525 1
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AAI clade 18
medoid: GCA 019113065 1
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AAI clade 19
medoid: GCA 016795075 1
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AAI clade 20
medoid: GCF 001467025 1
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AAI clade 21
medoid: GCA 017642855 1
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AAI clade 22
medoid: GCA 017408305 1
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AAI clade 23
medoid: GCA 002436405 1